Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDLRAD2Q5SZI1 AC006455.2-201ENST00000429931 906 ntBASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDLRAD2Q5SZI1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 ANOS2P-203ENST00000472227 1816 ntBASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.18■□□□□ 0.5
LDLRAD2Q5SZI1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.17■□□□□ 0.5
LDLRAD2Q5SZI1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 AC144652.1-201ENST00000609974 1624 ntBASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 AC110285.6-201ENST00000617652 491 ntBASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDLRAD2Q5SZI1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 AC096631.2-201ENST00000436136 790 ntBASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.15■□□□□ 0.5
LDLRAD2Q5SZI1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.14■□□□□ 0.49
LDLRAD2Q5SZI1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDLRAD2Q5SZI1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDLRAD2Q5SZI1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms