Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.15■□□□□ 0.66
AP3S2P59780 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.15■□□□□ 0.66
AP3S2P59780 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3S2P59780 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
AP3S2P59780 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S2P59780 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
AP3S2P59780 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S2P59780 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.14■□□□□ 0.65
AP3S2P59780 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.14■□□□□ 0.65
AP3S2P59780 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.14■□□□□ 0.65
AP3S2P59780 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
AP3S2P59780 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S2P59780 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S2P59780 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S2P59780 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S2P59780 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3S2P59780 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3S2P59780 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
AP3S2P59780 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
AP3S2P59780 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.13■□□□□ 0.65
AP3S2P59780 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S2P59780 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3S2P59780 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3S2P59780 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
AP3S2P59780 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP3S2P59780 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S2P59780 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3S2P59780 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.12■□□□□ 0.65
AP3S2P59780 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AP3S2P59780 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
AP3S2P59780 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S2P59780 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S2P59780 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
AP3S2P59780 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP3S2P59780 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
AP3S2P59780 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 AL022069.1-201ENST00000568025 1636 ntBASIC19.11■□□□□ 0.65
AP3S2P59780 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S2P59780 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP3S2P59780 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AP3S2P59780 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S2P59780 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.1■□□□□ 0.65
AP3S2P59780 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.1■□□□□ 0.65
AP3S2P59780 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.1■□□□□ 0.65
AP3S2P59780 AC090877.2-201ENST00000558441 1738 ntBASIC19.1■□□□□ 0.65
AP3S2P59780 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S2P59780 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP3S2P59780 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S2P59780 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.09■□□□□ 0.65
AP3S2P59780 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AP3S2P59780 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S2P59780 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S2P59780 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S2P59780 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AP3S2P59780 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3S2P59780 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.09■□□□□ 0.65
AP3S2P59780 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.09■□□□□ 0.65
AP3S2P59780 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
AP3S2P59780 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S2P59780 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.08■□□□□ 0.65
AP3S2P59780 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S2P59780 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
AP3S2P59780 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S2P59780 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S2P59780 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S2P59780 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S2P59780 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.08■□□□□ 0.64
AP3S2P59780 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S2P59780 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3S2P59780 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
AP3S2P59780 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP3S2P59780 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3S2P59780 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3S2P59780 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms