Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH4P55283 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CDH4P55283 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CDH4P55283 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CDH4P55283 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
CDH4P55283 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH4P55283 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.88■■□□□ 1.25
CDH4P55283 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.88■■□□□ 1.25
CDH4P55283 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH4P55283 EDA-201ENST00000338901 1233 ntBASIC22.88■■□□□ 1.25
CDH4P55283 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.88■■□□□ 1.25
CDH4P55283 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.88■■□□□ 1.25
CDH4P55283 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH4P55283 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.88■■□□□ 1.25
CDH4P55283 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH4P55283 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH4P55283 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CDH4P55283 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH4P55283 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH4P55283 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH4P55283 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH4P55283 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDH4P55283 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CDH4P55283 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.87■■□□□ 1.25
CDH4P55283 AC133637.1-201ENST00000624115 1537 ntBASIC22.87■■□□□ 1.25
CDH4P55283 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CDH4P55283 AC005837.3-201ENST00000612163 286 ntBASIC22.86■■□□□ 1.25
CDH4P55283 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.86■■□□□ 1.25
CDH4P55283 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH4P55283 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH4P55283 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH4P55283 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.86■■□□□ 1.25
CDH4P55283 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
CDH4P55283 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH4P55283 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CDH4P55283 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.85■■□□□ 1.25
CDH4P55283 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
CDH4P55283 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.85■■□□□ 1.25
CDH4P55283 AL355001.2-201ENST00000620617 1191 ntBASIC22.85■■□□□ 1.25
CDH4P55283 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.85■■□□□ 1.25
CDH4P55283 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.85■■□□□ 1.25
CDH4P55283 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH4P55283 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CDH4P55283 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 AL031432.3-201ENST00000607698 485 ntBASIC22.84■■□□□ 1.25
CDH4P55283 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CDH4P55283 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.84■■□□□ 1.25
CDH4P55283 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.84■■□□□ 1.25
CDH4P55283 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.84■■□□□ 1.25
CDH4P55283 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH4P55283 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDH4P55283 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.83■■□□□ 1.25
CDH4P55283 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.83■■□□□ 1.25
CDH4P55283 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDH4P55283 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDH4P55283 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.83■■□□□ 1.25
CDH4P55283 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.83■■□□□ 1.25
CDH4P55283 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CDH4P55283 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CDH4P55283 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.82■■□□□ 1.24
CDH4P55283 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.82■■□□□ 1.24
CDH4P55283 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.82■■□□□ 1.24
CDH4P55283 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.82■■□□□ 1.24
CDH4P55283 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDH4P55283 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.82■■□□□ 1.24
CDH4P55283 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.82■■□□□ 1.24
CDH4P55283 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH4P55283 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH4P55283 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.81■■□□□ 1.24
CDH4P55283 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CDH4P55283 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH4P55283 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.81■■□□□ 1.24
CDH4P55283 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDH4P55283 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH4P55283 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.81■■□□□ 1.24
CDH4P55283 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms