Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRIM2P49643 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRIM2P49643 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PRIM2P49643 KRT125P-201ENST00000546827 989 ntBASIC21.12■□□□□ 0.97
PRIM2P49643 Z92544.1-202ENST00000571933 1220 ntBASIC21.12■□□□□ 0.97
PRIM2P49643 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRIM2P49643 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PRIM2P49643 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PRIM2P49643 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.11■□□□□ 0.97
PRIM2P49643 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.11■□□□□ 0.97
PRIM2P49643 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PRIM2P49643 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PRIM2P49643 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRIM2P49643 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRIM2P49643 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRIM2P49643 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.1■□□□□ 0.97
PRIM2P49643 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PRIM2P49643 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRIM2P49643 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.09■□□□□ 0.97
PRIM2P49643 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.09■□□□□ 0.97
PRIM2P49643 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRIM2P49643 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PRIM2P49643 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.09■□□□□ 0.97
PRIM2P49643 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.09■□□□□ 0.97
PRIM2P49643 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.09■□□□□ 0.97
PRIM2P49643 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PRIM2P49643 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PRIM2P49643 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRIM2P49643 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PRIM2P49643 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
PRIM2P49643 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PRIM2P49643 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.08■□□□□ 0.97
PRIM2P49643 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.08■□□□□ 0.97
PRIM2P49643 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PRIM2P49643 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.08■□□□□ 0.97
PRIM2P49643 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.08■□□□□ 0.97
PRIM2P49643 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRIM2P49643 AL451085.2-201ENST00000605085 799 ntBASIC21.08■□□□□ 0.97
PRIM2P49643 MIR6722-201ENST00000617286 78 ntBASIC21.08■□□□□ 0.97
PRIM2P49643 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRIM2P49643 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PRIM2P49643 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.08■□□□□ 0.96
PRIM2P49643 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRIM2P49643 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRIM2P49643 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.07■□□□□ 0.96
PRIM2P49643 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRIM2P49643 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRIM2P49643 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.07■□□□□ 0.96
PRIM2P49643 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.07■□□□□ 0.96
PRIM2P49643 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRIM2P49643 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.07■□□□□ 0.96
PRIM2P49643 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.07■□□□□ 0.96
PRIM2P49643 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRIM2P49643 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.06■□□□□ 0.96
PRIM2P49643 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.06■□□□□ 0.96
PRIM2P49643 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.06■□□□□ 0.96
PRIM2P49643 AC092028.1-203ENST00000608262 953 ntBASIC21.06■□□□□ 0.96
PRIM2P49643 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.06■□□□□ 0.96
PRIM2P49643 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRIM2P49643 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRIM2P49643 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms