Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MIR6722-201ENST00000617286 78 ntBASIC19.56■□□□□ 0.72
CX3CR1P49238 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CX3CR1P49238 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.56■□□□□ 0.72
CX3CR1P49238 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CX3CR1P49238 AC005703.6-201ENST00000623265 1329 ntBASIC19.55■□□□□ 0.72
CX3CR1P49238 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CR1P49238 RARRES2P1-201ENST00000474487 481 ntBASIC19.55■□□□□ 0.72
CX3CR1P49238 KRT125P-201ENST00000546827 989 ntBASIC19.55■□□□□ 0.72
CX3CR1P49238 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.55■□□□□ 0.72
CX3CR1P49238 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CR1P49238 AC233723.2-201ENST00000623798 2106 ntBASIC19.55■□□□□ 0.72
CX3CR1P49238 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CR1P49238 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CX3CR1P49238 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CX3CR1P49238 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CR1P49238 AL353803.4-201ENST00000565882 1934 ntBASIC19.55■□□□□ 0.72
CX3CR1P49238 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CX3CR1P49238 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CX3CR1P49238 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CX3CR1P49238 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CX3CR1P49238 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
CX3CR1P49238 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CX3CR1P49238 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CX3CR1P49238 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CX3CR1P49238 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CX3CR1P49238 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CR1P49238 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CX3CR1P49238 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CR1P49238 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CR1P49238 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CR1P49238 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CR1P49238 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.53■□□□□ 0.72
CX3CR1P49238 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CX3CR1P49238 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
CX3CR1P49238 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CX3CR1P49238 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.52■□□□□ 0.72
CX3CR1P49238 Z92544.1-202ENST00000571933 1220 ntBASIC19.52■□□□□ 0.72
CX3CR1P49238 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CX3CR1P49238 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CX3CR1P49238 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CX3CR1P49238 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.52■□□□□ 0.71
CX3CR1P49238 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.52■□□□□ 0.71
CX3CR1P49238 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.51■□□□□ 0.71
CX3CR1P49238 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
CX3CR1P49238 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.51■□□□□ 0.71
CX3CR1P49238 AC092028.1-203ENST00000608262 953 ntBASIC19.51■□□□□ 0.71
CX3CR1P49238 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CX3CR1P49238 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.51■□□□□ 0.71
CX3CR1P49238 AC144652.1-201ENST00000609974 1624 ntBASIC19.51■□□□□ 0.71
CX3CR1P49238 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.51■□□□□ 0.71
CX3CR1P49238 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CX3CR1P49238 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.5■□□□□ 0.71
CX3CR1P49238 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CX3CR1P49238 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CX3CR1P49238 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.5■□□□□ 0.71
CX3CR1P49238 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CX3CR1P49238 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CX3CR1P49238 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.5■□□□□ 0.71
CX3CR1P49238 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CX3CR1P49238 AL117328.2-201ENST00000624617 1940 ntBASIC19.5■□□□□ 0.71
CX3CR1P49238 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.5■□□□□ 0.71
CX3CR1P49238 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CX3CR1P49238 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.49■□□□□ 0.71
CX3CR1P49238 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CX3CR1P49238 MTDHP2-201ENST00000601468 714 ntBASIC19.49■□□□□ 0.71
CX3CR1P49238 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
CX3CR1P49238 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.49■□□□□ 0.71
CX3CR1P49238 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.49■□□□□ 0.71
CX3CR1P49238 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CX3CR1P49238 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CX3CR1P49238 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CX3CR1P49238 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.49■□□□□ 0.71
CX3CR1P49238 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms