Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCNN1AP37088 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCNN1AP37088 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.33■■□□□ 1.33
SCNN1AP37088 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCNN1AP37088 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
SCNN1AP37088 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.33■■□□□ 1.33
SCNN1AP37088 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCNN1AP37088 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.33■■□□□ 1.33
SCNN1AP37088 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.33■■□□□ 1.33
SCNN1AP37088 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.33■■□□□ 1.32
SCNN1AP37088 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.33■■□□□ 1.32
SCNN1AP37088 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SCNN1AP37088 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.32■■□□□ 1.32
SCNN1AP37088 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.32■■□□□ 1.32
SCNN1AP37088 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCNN1AP37088 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCNN1AP37088 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCNN1AP37088 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCNN1AP37088 AC099791.2-201ENST00000605725 427 ntBASIC23.31■■□□□ 1.32
SCNN1AP37088 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SCNN1AP37088 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCNN1AP37088 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.3■■□□□ 1.32
SCNN1AP37088 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.3■■□□□ 1.32
SCNN1AP37088 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCNN1AP37088 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
SCNN1AP37088 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.29■■□□□ 1.32
SCNN1AP37088 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SCNN1AP37088 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.29■■□□□ 1.32
SCNN1AP37088 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCNN1AP37088 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.28■■□□□ 1.32
SCNN1AP37088 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.28■■□□□ 1.32
SCNN1AP37088 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.28■■□□□ 1.32
SCNN1AP37088 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.28■■□□□ 1.32
SCNN1AP37088 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SCNN1AP37088 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCNN1AP37088 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCNN1AP37088 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCNN1AP37088 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCNN1AP37088 AC006455.2-201ENST00000429931 906 ntBASIC23.27■■□□□ 1.32
SCNN1AP37088 DUX4L19-201ENST00000557448 1267 ntBASIC23.27■■□□□ 1.32
SCNN1AP37088 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.27■■□□□ 1.32
SCNN1AP37088 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCNN1AP37088 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SCNN1AP37088 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.26■■□□□ 1.31
SCNN1AP37088 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.26■■□□□ 1.31
SCNN1AP37088 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.26■■□□□ 1.31
SCNN1AP37088 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SCNN1AP37088 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SCNN1AP37088 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.26■■□□□ 1.31
SCNN1AP37088 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.26■■□□□ 1.31
SCNN1AP37088 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCNN1AP37088 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCNN1AP37088 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.25■■□□□ 1.31
SCNN1AP37088 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCNN1AP37088 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.25■■□□□ 1.31
SCNN1AP37088 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCNN1AP37088 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.25■■□□□ 1.31
SCNN1AP37088 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.25■■□□□ 1.31
SCNN1AP37088 AL138724.1-201ENST00000606771 1088 ntBASIC23.25■■□□□ 1.31
SCNN1AP37088 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SCNN1AP37088 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
SCNN1AP37088 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SCNN1AP37088 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.24■■□□□ 1.31
SCNN1AP37088 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SCNN1AP37088 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SCNN1AP37088 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SCNN1AP37088 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCNN1AP37088 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SCNN1AP37088 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms