Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN6P29350 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN6P29350 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN6P29350 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPN6P29350 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN6P29350 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN6P29350 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN6P29350 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN6P29350 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPN6P29350 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN6P29350 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN6P29350 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN6P29350 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTPN6P29350 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPN6P29350 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN6P29350 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN6P29350 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN6P29350 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN6P29350 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN6P29350 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN6P29350 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN6P29350 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PTPN6P29350 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
PTPN6P29350 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN6P29350 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN6P29350 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPN6P29350 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN6P29350 AL353803.4-201ENST00000565882 1934 ntBASIC21.16■□□□□ 0.98
PTPN6P29350 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTPN6P29350 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN6P29350 ESRRAP2-201ENST00000418437 1549 ntBASIC21.15■□□□□ 0.98
PTPN6P29350 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN6P29350 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN6P29350 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN6P29350 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN6P29350 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN6P29350 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN6P29350 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN6P29350 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.98
PTPN6P29350 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.14■□□□□ 0.98
PTPN6P29350 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN6P29350 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN6P29350 AC092028.1-203ENST00000608262 953 ntBASIC21.14■□□□□ 0.97
PTPN6P29350 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN6P29350 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN6P29350 UNC93B8-201ENST00000511903 705 ntBASIC21.13■□□□□ 0.97
PTPN6P29350 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PTPN6P29350 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN6P29350 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN6P29350 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN6P29350 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN6P29350 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN6P29350 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN6P29350 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN6P29350 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN6P29350 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN6P29350 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPN6P29350 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN6P29350 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN6P29350 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN6P29350 AC127496.7-201ENST00000625110 1798 ntBASIC21.12■□□□□ 0.97
PTPN6P29350 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN6P29350 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PTPN6P29350 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN6P29350 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN6P29350 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms