Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNFRSF1AP19438 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 AC006455.2-201ENST00000429931 906 ntBASIC18.87■□□□□ 0.61
TNFRSF1AP19438 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 AC133561.4-201ENST00000566112 224 ntBASIC18.87■□□□□ 0.61
TNFRSF1AP19438 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF1AP19438 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 MIR3181-201ENST00000578512 73 ntBASIC18.86■□□□□ 0.61
TNFRSF1AP19438 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF1AP19438 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.85■□□□□ 0.61
TNFRSF1AP19438 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 AC024257.2-201ENST00000549699 147 ntBASIC18.85■□□□□ 0.61
TNFRSF1AP19438 AL499627.2-201ENST00000606283 725 ntBASIC18.85■□□□□ 0.61
TNFRSF1AP19438 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 AC092068.2-201ENST00000590491 1708 ntBASIC18.85■□□□□ 0.61
TNFRSF1AP19438 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF1AP19438 AL353803.4-201ENST00000565882 1934 ntBASIC18.84■□□□□ 0.61
TNFRSF1AP19438 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 ANOS2P-203ENST00000472227 1816 ntBASIC18.84■□□□□ 0.61
TNFRSF1AP19438 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 AC136469.2-201ENST00000623944 1028 ntBASIC18.84■□□□□ 0.61
TNFRSF1AP19438 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.84■□□□□ 0.61
TNFRSF1AP19438 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1AP19438 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1AP19438 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.83■□□□□ 0.61
TNFRSF1AP19438 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.83■□□□□ 0.61
TNFRSF1AP19438 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 EDA-201ENST00000338901 1233 ntBASIC18.83■□□□□ 0.6
TNFRSF1AP19438 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1AP19438 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1AP19438 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms