Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.594e-7■■■□□ 15.2
XRCC6P12956 XPO6-223ENST00000574435 765 ntTSL 518.06■□□□□ 0.484e-7■■■□□ 15.2
XRCC6P12956 XPO6-217ENST00000569973 544 ntTSL 417.47■□□□□ 0.394e-7■■■□□ 15.2
XRCC6P12956 XPO6-222ENST00000573645 509 ntTSL 313.74□□□□□ -0.214e-7■■■□□ 15.2
XRCC6P12956 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC13.44□□□□□ -0.264e-7■■■□□ 15.2
XRCC6P12956 RPL23A-209ENST00000582736 595 ntTSL 1 (best)16.02■□□□□ 0.169e-23■■■□□ 15.2
XRCC6P12956 SNORD42B-201ENST00000458893 67 ntBASIC0.2□□□□□ -2.389e-23■■■□□ 15.2
XRCC6P12956 FASN-213ENST00000637693 100 ntTSL 510.6□□□□□ -0.711e-13■■■□□ 15.2
XRCC6P12956 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.762e-6■■■□□ 15.2
XRCC6P12956 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.632e-6■■■□□ 15.2
XRCC6P12956 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.632e-6■■■□□ 15.2
XRCC6P12956 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)18.52■□□□□ 0.562e-6■■■□□ 15.2
XRCC6P12956 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.05■□□□□ 0.482e-6■■■□□ 15.2
XRCC6P12956 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)15.45■□□□□ 0.062e-6■■■□□ 15.2
XRCC6P12956 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC14.92□□□□□ -0.022e-6■■■□□ 15.2
XRCC6P12956 PEG3-207ENST00000599534 5115 ntAPPRIS P1 TSL 1 (best)14.72□□□□□ -0.052e-6■■■□□ 15.2
XRCC6P12956 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■□□ 15.2
XRCC6P12956 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)10.7□□□□□ -0.72e-6■■■□□ 15.2
XRCC6P12956 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.72e-6■■■□□ 15.2
XRCC6P12956 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.86■■■■□ 3.333e-7■■■□□ 15
XRCC6P12956 TANGO2-226ENST00000490583 888 ntTSL 318.68■□□□□ 0.583e-6■■■□□ 15
XRCC6P12956 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.51■■■□□ 2.151e-5■■■□□ 14.9
XRCC6P12956 MAFG-203ENST00000574686 570 ntTSL 525.03■■□□□ 1.61e-5■■■□□ 14.9
XRCC6P12956 UBXN6-203ENST00000587009 1967 ntTSL 224.97■■□□□ 1.591e-5■■■□□ 14.9
XRCC6P12956 CPNE7-203ENST00000525982 576 ntTSL 524.04■■□□□ 1.441e-5■■■□□ 14.9
XRCC6P12956 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.351e-5■■■□□ 14.9
XRCC6P12956 BRAF-202ENST00000469930 1058 ntTSL 223.33■■□□□ 1.331e-5■■■□□ 14.9
XRCC6P12956 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.31e-5■■■□□ 14.9
XRCC6P12956 HGS-215ENST00000576393 922 ntTSL 223.15■■□□□ 1.31e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.21e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-215ENST00000514093 842 ntTSL 522.37■■□□□ 1.171e-5■■■□□ 14.9
XRCC6P12956 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.161e-5■■■□□ 14.9
XRCC6P12956 NOL3-206ENST00000564992 677 ntAPPRIS ALT2 TSL 222.11■■□□□ 1.131e-5■■■□□ 14.9
XRCC6P12956 NOL3-203ENST00000563439 642 ntAPPRIS ALT2 TSL 321.97■■□□□ 1.111e-5■■■□□ 14.9
XRCC6P12956 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.091e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.35■■□□□ 1.011e-5■■■□□ 14.9
XRCC6P12956 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.971e-5■■■□□ 14.9
XRCC6P12956 DHRS3-201ENST00000430996 826 ntTSL 321.09■□□□□ 0.971e-5■■■□□ 14.9
XRCC6P12956 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.961e-5■■■□□ 14.9
XRCC6P12956 GOLGA8B-208ENST00000567956 533 ntTSL 221.04■□□□□ 0.961e-5■■■□□ 14.9
XRCC6P12956 GOLGA8B-205ENST00000564575 574 ntTSL 421.04■□□□□ 0.961e-5■■■□□ 14.9
XRCC6P12956 UBXN6-207ENST00000591919 1613 ntTSL 520.86■□□□□ 0.931e-5■■■□□ 14.9
XRCC6P12956 COQ8A-209ENST00000489044 941 ntTSL 320.68■□□□□ 0.91e-5■■■□□ 14.9
XRCC6P12956 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.841e-5■■■□□ 14.9
XRCC6P12956 NOL3-208ENST00000565645 519 ntTSL 420.31■□□□□ 0.841e-5■■■□□ 14.9
XRCC6P12956 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.841e-5■■■□□ 14.9
XRCC6P12956 HGS-216ENST00000576498 1004 ntTSL 220.12■□□□□ 0.811e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-212ENST00000508284 578 ntTSL 419.95■□□□□ 0.781e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-209ENST00000504627 602 ntTSL 519.95■□□□□ 0.781e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-204ENST00000453046 572 ntTSL 419.95■□□□□ 0.781e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.56■□□□□ 0.721e-5■■■□□ 14.9
XRCC6P12956 NOL3-207ENST00000565560 579 ntAPPRIS ALT2 TSL 319.33■□□□□ 0.681e-5■■■□□ 14.9
XRCC6P12956 NOL3-212ENST00000568199 613 ntTSL 319.09■□□□□ 0.651e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.541e-5■■■□□ 14.9
XRCC6P12956 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.36■□□□□ 0.531e-5■■■□□ 14.9
XRCC6P12956 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.77■□□□□ 0.441e-5■■■□□ 14.9
XRCC6P12956 PLOD1-203ENST00000429000 886 ntTSL 517.77■□□□□ 0.441e-5■■■□□ 14.9
XRCC6P12956 UBXN6-205ENST00000588238 4598 nt17.57■□□□□ 0.41e-5■■■□□ 14.9
XRCC6P12956 HGS-214ENST00000576087 548 ntTSL 417.57■□□□□ 0.41e-5■■■□□ 14.9
XRCC6P12956 HGS-208ENST00000572392 824 ntTSL 517.54■□□□□ 0.41e-5■■■□□ 14.9
XRCC6P12956 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.47■□□□□ 0.391e-5■■■□□ 14.9
XRCC6P12956 PDCD6-203ENST00000505526 1484 ntTSL 1 (best)17.35■□□□□ 0.371e-5■■■□□ 14.9
XRCC6P12956 NAB1-207ENST00000426601 545 ntTSL 417.17■□□□□ 0.341e-5■■■□□ 14.9
XRCC6P12956 DHRS3-203ENST00000482265 1036 ntTSL 317.04■□□□□ 0.321e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.211e-5■■■□□ 14.9
XRCC6P12956 GOLGA8B-207ENST00000566258 540 ntTSL 416.38■□□□□ 0.211e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-205ENST00000464493 532 ntTSL 416.23■□□□□ 0.191e-5■■■□□ 14.9
XRCC6P12956 COQ8A-204ENST00000476488 264 ntTSL 316.18■□□□□ 0.181e-5■■■□□ 14.9
XRCC6P12956 PLOD1-208ENST00000485046 991 ntTSL 516.17■□□□□ 0.181e-5■■■□□ 14.9
XRCC6P12956 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.98■□□□□ 0.151e-5■■■□□ 14.9
XRCC6P12956 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.11e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-209ENST00000535641 2627 ntTSL 215.25■□□□□ 0.031e-5■■■□□ 14.9
XRCC6P12956 PDCD6-204ENST00000506909 458 ntTSL 315.17■□□□□ 0.021e-5■■■□□ 14.9
XRCC6P12956 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.011e-5■■■□□ 14.9
XRCC6P12956 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.97□□□□□ -0.011e-5■■■□□ 14.9
XRCC6P12956 DHRS3-202ENST00000464917 539 ntTSL 314.55□□□□□ -0.081e-5■■■□□ 14.9
XRCC6P12956 PDCD6-210ENST00000513582 3500 ntTSL 214.44□□□□□ -0.11e-5■■■□□ 14.9
XRCC6P12956 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-5■■■□□ 14.9
XRCC6P12956 NSD2-216ENST00000507820 528 ntTSL 514.23□□□□□ -0.131e-5■■■□□ 14.9
XRCC6P12956 USP32-207ENST00000588898 578 ntTSL 513.98□□□□□ -0.171e-5■■■□□ 14.9
XRCC6P12956 PLOD1-205ENST00000465920 871 ntTSL 513.68□□□□□ -0.221e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-207ENST00000481335 562 ntTSL 413.53□□□□□ -0.241e-5■■■□□ 14.9
XRCC6P12956 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC12.88□□□□□ -0.351e-5■■■□□ 14.9
XRCC6P12956 SQSTM1-203ENST00000422245 628 ntTSL 412.84□□□□□ -0.351e-5■■■□□ 14.9
XRCC6P12956 CTTN-209ENST00000525276 584 ntTSL 312.74□□□□□ -0.371e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-205ENST00000534976 3165 ntTSL 512.58□□□□□ -0.41e-5■■■□□ 14.9
XRCC6P12956 NAB1-209ENST00000448811 590 ntTSL 412.52□□□□□ -0.411e-5■■■□□ 14.9
XRCC6P12956 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.441e-5■■■□□ 14.9
XRCC6P12956 GOLGA8B-210ENST00000569100 6488 ntTSL 512.14□□□□□ -0.471e-5■■■□□ 14.9
XRCC6P12956 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.471e-5■■■□□ 14.9
XRCC6P12956 NAB1-204ENST00000416973 568 ntTSL 411.67□□□□□ -0.541e-5■■■□□ 14.9
XRCC6P12956 USP32-210ENST00000589761 430 ntTSL 211.63□□□□□ -0.551e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-203ENST00000422342 1141 ntTSL 211.6□□□□□ -0.551e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-205ENST00000506625 610 ntTSL 411□□□□□ -0.651e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC10.85□□□□□ -0.671e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-219ENST00000544314 1508 ntTSL 210.43□□□□□ -0.741e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-214ENST00000539079 1715 ntTSL 1 (best)10.3□□□□□ -0.761e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC9.98□□□□□ -0.811e-5■■■□□ 14.9
XRCC6P12956 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC9.62□□□□□ -0.871e-5■■■□□ 14.9
XRCC6P12956 ELOVL6-204ENST00000506461 575 ntTSL 49.31□□□□□ -0.921e-5■■■□□ 14.9
Retrieved 100 of 6,788 protein–RNA pairs in 45.2 ms