Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP4P12644 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP4P12644 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BMP4P12644 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP4P12644 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.33■□□□□ 0.85
BMP4P12644 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP4P12644 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.33■□□□□ 0.85
BMP4P12644 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BMP4P12644 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BMP4P12644 HLA-L-211ENST00000482052 1765 ntBASIC20.33■□□□□ 0.84
BMP4P12644 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BMP4P12644 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP4P12644 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.32■□□□□ 0.84
BMP4P12644 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.32■□□□□ 0.84
BMP4P12644 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP4P12644 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
BMP4P12644 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.31■□□□□ 0.84
BMP4P12644 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
BMP4P12644 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP4P12644 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BMP4P12644 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BMP4P12644 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 AC073130.3-201ENST00000624389 2278 ntBASIC20.29■□□□□ 0.84
BMP4P12644 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 AC131212.1-201ENST00000613771 668 ntBASIC20.29■□□□□ 0.84
BMP4P12644 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BMP4P12644 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BMP4P12644 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BMP4P12644 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.28■□□□□ 0.84
BMP4P12644 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BMP4P12644 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BMP4P12644 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BMP4P12644 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.28■□□□□ 0.84
BMP4P12644 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BMP4P12644 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.28■□□□□ 0.84
BMP4P12644 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
BMP4P12644 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BMP4P12644 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BMP4P12644 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
BMP4P12644 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BMP4P12644 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BMP4P12644 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BMP4P12644 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BMP4P12644 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.26■□□□□ 0.83
BMP4P12644 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.26■□□□□ 0.83
BMP4P12644 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BMP4P12644 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BMP4P12644 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BMP4P12644 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.26■□□□□ 0.83
BMP4P12644 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
BMP4P12644 AC092068.2-201ENST00000590491 1708 ntBASIC20.26■□□□□ 0.83
BMP4P12644 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BMP4P12644 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.26■□□□□ 0.83
BMP4P12644 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.26■□□□□ 0.83
BMP4P12644 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.25■□□□□ 0.83
BMP4P12644 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BMP4P12644 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BMP4P12644 AC120024.1-201ENST00000562672 995 ntBASIC20.25■□□□□ 0.83
BMP4P12644 MIR4787-201ENST00000607364 84 ntBASIC20.25■□□□□ 0.83
BMP4P12644 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.25■□□□□ 0.83
BMP4P12644 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BMP4P12644 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BMP4P12644 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms