Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 SNA3YJL151C 402 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 SOP4YJL192C 705 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 RNT1YMR239C 1416 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 RPL3YOR063W 1164 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 SVS1YPL163C 783 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 DBP9YLR276C 1785 nt6.8□□□□□ -1.32
TY1A-LR1P0CX68 INO1YJL153C 1602 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 YER158W-AYER158W-A 216 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 RPT6YGL048C 1218 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 YGR018CYGR018C 330 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 YIL077CYIL077C 963 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 TDA4YJR116W 840 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 RRN9YMR270C 1098 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 DFR1YOR236W 636 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 TGL5YOR081C 2250 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 MSN4YKL062W 1893 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 RSC9YML127W 1746 nt6.79□□□□□ -1.32
TY1A-LR1P0CX68 RRP42YDL111C 798 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 VRG4YGL225W 1014 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 GRE3YHR104W 984 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 YIR020W-AYIR020W-A 243 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 SDO1YLR022C 753 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 YAF9YNL107W 681 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 CUZ1YNL155W 825 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 MAP2YBL091C 1266 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 ATG5YPL149W 885 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 YPR127WYPR127W 1038 nt6.78□□□□□ -1.32
TY1A-LR1P0CX68 CDC37YDR168W 1521 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 RMD8YFR048W 1989 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 NUS1YDL193W 1128 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 RPL12BYDR418W 498 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 TMA20YER007C-A 546 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 SNL1YIL016W 480 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 AIM24YJR080C 1185 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 PAU16YKL224C 372 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 YBL010CYBL010C 843 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 ADI1YMR009W 540 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 CYC2YOR037W 1101 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 YOR366WYOR366W 354 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 DIP5YPL265W 1827 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 GUT1YHL032C 2130 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 NSE5YML023C 1671 nt6.77□□□□□ -1.33
TY1A-LR1P0CX68 BUD8YLR353W 1812 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 MAL31YBR298C 1845 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 RTT105YER104W 627 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 ISC10YER180C 804 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 NTG1YAL015C 1200 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 YPT7YML001W 627 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 FPR3YML074C 1236 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 SDH5YOL071W 489 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 SNT309YPR101W 528 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 YMR111CYMR111C 1389 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 CDC1YDR182W 1476 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 LCB2YDR062W 1686 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 RUP1YOR138C 2016 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 RPT1YKL145W 1404 nt6.76□□□□□ -1.33
TY1A-LR1P0CX68 GAS1YMR307W 1680 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 GIT1YCR098C 1557 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 ORC4YPR162C 1590 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 CDC34YDR054C 888 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YER068C-AYER068C-A 432 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YER097WYER097W 330 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 FAU1YER183C 636 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YGL199CYGL199C 471 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YGR210CYGR210C 1236 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 GEP5YLR091W 882 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 RPS30AYLR287C-A 192 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YMR087WYMR087W 855 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 AIM39YOL053W 1188 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YPL088WYPL088W 1029 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 PEX28YHR150W 1740 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 PLB3YOL011W 2061 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 YOR389WYOR389W 1875 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 SRF1YDL133W 1314 nt6.75□□□□□ -1.33
TY1A-LR1P0CX68 FCY22YER060W-A 1593 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 TOD6YBL054W 1578 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 YDL183CYDL183C 963 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 RME1YGR044C 903 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 PEX21YGR239C 867 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 YIL068W-AYIL068W-A 384 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 FUN19YAL034C 1242 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 SRP40YKR092C 1221 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 CDA1YLR307W 906 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 SNZ1YMR096W 894 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 YSF3YNL138W-A 258 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 MNN9YPL050C 1188 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 GRE1YPL223C 507 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 AMF1YOR378W 1548 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 MAL12YGR292W 1755 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 IMA3YIL172C 1770 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 IMA4YJL221C 1770 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 MAL32YBR299W 1755 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 THI20YOL055C 1656 nt6.74□□□□□ -1.33
TY1A-LR1P0CX68 PES4YFR023W 1836 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 JIP5YPR169W 1479 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 YBL113CYBL113C 2379 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 ERS1YCR075C 783 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 YDL240C-AYDL240C-A 138 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 SPT2YER161C 1002 nt6.73□□□□□ -1.33
TY1A-LR1P0CX68 RPL16AYIL133C 600 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms