Protein–RNA interactions for Protein: P0C860

MSL3P1, Putative male-specific lethal-3 protein-like 2, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1P0C860 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 AC027682.1-201ENST00000562846 899 ntBASIC21.42■■□□□ 1.02
MSL3P1P0C860 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 AF213884.3-201ENST00000563833 479 ntBASIC21.42■■□□□ 1.02
MSL3P1P0C860 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.42■■□□□ 1.02
MSL3P1P0C860 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSL3P1P0C860 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
MSL3P1P0C860 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 RASA4CP-201ENST00000424092 1398 ntBASIC21.41■■□□□ 1.02
MSL3P1P0C860 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.41■■□□□ 1.02
MSL3P1P0C860 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.41■■□□□ 1.02
MSL3P1P0C860 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSL3P1P0C860 AC012676.1-201ENST00000574705 1949 ntBASIC21.41■■□□□ 1.02
MSL3P1P0C860 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.41■■□□□ 1.02
MSL3P1P0C860 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
MSL3P1P0C860 LINC01124-201ENST00000409786 2117 ntBASIC21.4■■□□□ 1.02
MSL3P1P0C860 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.4■■□□□ 1.02
MSL3P1P0C860 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.4■■□□□ 1.02
MSL3P1P0C860 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSL3P1P0C860 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.4■■□□□ 1.02
MSL3P1P0C860 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.39■■□□□ 1.02
MSL3P1P0C860 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.02
MSL3P1P0C860 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MSL3P1P0C860 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MSL3P1P0C860 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MSL3P1P0C860 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MSL3P1P0C860 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MSL3P1P0C860 DUX4L4-201ENST00000566884 1269 ntBASIC21.39■■□□□ 1.01
MSL3P1P0C860 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MSL3P1P0C860 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MSL3P1P0C860 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MSL3P1P0C860 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MSL3P1P0C860 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.38■■□□□ 1.01
MSL3P1P0C860 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
MSL3P1P0C860 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
MSL3P1P0C860 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 AL499627.2-201ENST00000606283 725 ntBASIC21.38■■□□□ 1.01
MSL3P1P0C860 pRNA.6-201ENST00000610482 90 ntBASIC21.38■■□□□ 1.01
MSL3P1P0C860 pRNA.5-201ENST00000612139 90 ntBASIC21.38■■□□□ 1.01
MSL3P1P0C860 pRNA.11-201ENST00000618423 90 ntBASIC21.38■■□□□ 1.01
MSL3P1P0C860 pRNA.13-201ENST00000619112 90 ntBASIC21.38■■□□□ 1.01
MSL3P1P0C860 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSL3P1P0C860 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 AC144652.1-201ENST00000609974 1624 ntBASIC21.37■■□□□ 1.01
MSL3P1P0C860 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 BX842568.3-201ENST00000418104 571 ntBASIC21.37■■□□□ 1.01
MSL3P1P0C860 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.37■■□□□ 1.01
MSL3P1P0C860 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MSL3P1P0C860 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MSL3P1P0C860 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MSL3P1P0C860 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MSL3P1P0C860 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MSL3P1P0C860 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.36■■□□□ 1.01
MSL3P1P0C860 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
MSL3P1P0C860 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
MSL3P1P0C860 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MSL3P1P0C860 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MSL3P1P0C860 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.35■■□□□ 1.01
MSL3P1P0C860 MIR935-201ENST00000401179 91 ntBASIC21.35■■□□□ 1.01
MSL3P1P0C860 ZNRF2P3-201ENST00000424200 374 ntBASIC21.35■■□□□ 1.01
MSL3P1P0C860 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.35■■□□□ 1.01
MSL3P1P0C860 AC233992.3-201ENST00000607491 485 ntBASIC21.35■■□□□ 1.01
MSL3P1P0C860 CA15P2-201ENST00000611168 834 ntBASIC21.35■■□□□ 1.01
MSL3P1P0C860 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MSL3P1P0C860 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MSL3P1P0C860 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSL3P1P0C860 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSL3P1P0C860 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSL3P1P0C860 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSL3P1P0C860 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSL3P1P0C860 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms