Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 DUSP8P3-201ENST00000399571 1760 ntBASIC19.67■□□□□ 0.74
ERCC1P07992 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC1P07992 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC1P07992 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC1P07992 MIR3621-201ENST00000580529 85 ntBASIC19.67■□□□□ 0.74
ERCC1P07992 SNX5-217ENST00000606557 1087 ntBASIC19.67■□□□□ 0.74
ERCC1P07992 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC1P07992 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC1P07992 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ERCC1P07992 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ERCC1P07992 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ERCC1P07992 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.66■□□□□ 0.74
ERCC1P07992 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.66■□□□□ 0.74
ERCC1P07992 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.66■□□□□ 0.74
ERCC1P07992 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.66■□□□□ 0.74
ERCC1P07992 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC1P07992 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ERCC1P07992 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 AL117328.2-201ENST00000624617 1940 ntBASIC19.65■□□□□ 0.74
ERCC1P07992 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
ERCC1P07992 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
ERCC1P07992 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.65■□□□□ 0.74
ERCC1P07992 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.65■□□□□ 0.74
ERCC1P07992 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ERCC1P07992 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ERCC1P07992 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ERCC1P07992 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC1P07992 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.65■□□□□ 0.74
ERCC1P07992 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC1P07992 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ERCC1P07992 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC1P07992 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC1P07992 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ERCC1P07992 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ERCC1P07992 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC1P07992 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.63■□□□□ 0.73
ERCC1P07992 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC1P07992 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC1P07992 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC1P07992 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 AL136116.3-201ENST00000402907 1138 ntBASIC19.62■□□□□ 0.73
ERCC1P07992 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC1P07992 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC1P07992 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC1P07992 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ERCC1P07992 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC1P07992 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC1P07992 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC1P07992 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC1P07992 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 AC004448.1-201ENST00000458332 883 ntBASIC19.61■□□□□ 0.73
ERCC1P07992 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC1P07992 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC1P07992 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms