Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NGFP01138 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NGFP01138 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.34■□□□□ 0.69
NGFP01138 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NGFP01138 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NGFP01138 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NGFP01138 DUSP8P3-201ENST00000399571 1760 ntBASIC19.33■□□□□ 0.68
NGFP01138 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
NGFP01138 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.33■□□□□ 0.68
NGFP01138 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NGFP01138 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
NGFP01138 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NGFP01138 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
NGFP01138 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.32■□□□□ 0.68
NGFP01138 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NGFP01138 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NGFP01138 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NGFP01138 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NGFP01138 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.31■□□□□ 0.68
NGFP01138 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.31■□□□□ 0.68
NGFP01138 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NGFP01138 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.31■□□□□ 0.68
NGFP01138 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NGFP01138 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.31■□□□□ 0.68
NGFP01138 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.31■□□□□ 0.68
NGFP01138 LINC01529-204ENST00000636474 1715 ntBASIC19.31■□□□□ 0.68
NGFP01138 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NGFP01138 FP325331.1-202ENST00000623531 1380 ntBASIC19.31■□□□□ 0.68
NGFP01138 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.3■□□□□ 0.68
NGFP01138 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NGFP01138 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NGFP01138 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.3■□□□□ 0.68
NGFP01138 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.3■□□□□ 0.68
NGFP01138 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NGFP01138 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NGFP01138 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NGFP01138 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.29■□□□□ 0.68
NGFP01138 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.29■□□□□ 0.68
NGFP01138 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.29■□□□□ 0.68
NGFP01138 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
NGFP01138 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.29■□□□□ 0.68
NGFP01138 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NGFP01138 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NGFP01138 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
NGFP01138 SRD5A1P1-201ENST00000442297 786 ntBASIC19.28■□□□□ 0.68
NGFP01138 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.28■□□□□ 0.68
NGFP01138 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NGFP01138 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
NGFP01138 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
NGFP01138 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
NGFP01138 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.27■□□□□ 0.68
NGFP01138 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NGFP01138 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NGFP01138 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NGFP01138 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.27■□□□□ 0.68
NGFP01138 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 AC099791.2-201ENST00000605725 427 ntBASIC19.27■□□□□ 0.68
NGFP01138 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NGFP01138 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.27■□□□□ 0.68
NGFP01138 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NGFP01138 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NGFP01138 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NGFP01138 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NGFP01138 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NGFP01138 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NGFP01138 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NGFP01138 DUX4L4-201ENST00000566884 1269 ntBASIC19.26■□□□□ 0.67
NGFP01138 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
NGFP01138 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NGFP01138 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
NGFP01138 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NGFP01138 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.26■□□□□ 0.67
NGFP01138 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NGFP01138 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms