Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.12■■□□□ 1.13
SOD1P00441 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
SOD1P00441 AP001330.3-201ENST00000520123 633 ntBASIC22.12■■□□□ 1.13
SOD1P00441 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.12■■□□□ 1.13
SOD1P00441 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
SOD1P00441 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.12■■□□□ 1.13
SOD1P00441 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 ANOS2P-203ENST00000472227 1816 ntBASIC22.11■■□□□ 1.13
SOD1P00441 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SOD1P00441 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.11■■□□□ 1.13
SOD1P00441 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.11■■□□□ 1.13
SOD1P00441 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.11■■□□□ 1.13
SOD1P00441 AL355001.2-201ENST00000620617 1191 ntBASIC22.11■■□□□ 1.13
SOD1P00441 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SOD1P00441 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SOD1P00441 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SOD1P00441 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
SOD1P00441 AL353803.4-201ENST00000565882 1934 ntBASIC22.1■■□□□ 1.13
SOD1P00441 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SOD1P00441 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SOD1P00441 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.1■■□□□ 1.13
SOD1P00441 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SOD1P00441 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.1■■□□□ 1.13
SOD1P00441 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.1■■□□□ 1.13
SOD1P00441 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
SOD1P00441 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.09■■□□□ 1.13
SOD1P00441 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.09■■□□□ 1.13
SOD1P00441 MIR939-201ENST00000401314 82 ntBASIC22.09■■□□□ 1.13
SOD1P00441 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.09■■□□□ 1.13
SOD1P00441 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SOD1P00441 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SOD1P00441 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SOD1P00441 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SOD1P00441 AC133637.1-201ENST00000624115 1537 ntBASIC22.08■■□□□ 1.13
SOD1P00441 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SOD1P00441 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SOD1P00441 AF213884.3-201ENST00000563833 479 ntBASIC22.08■■□□□ 1.13
SOD1P00441 AL136967.2-201ENST00000623968 743 ntBASIC22.08■■□□□ 1.13
SOD1P00441 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.08■■□□□ 1.12
SOD1P00441 AC092068.2-201ENST00000590491 1708 ntBASIC22.08■■□□□ 1.12
SOD1P00441 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.08■■□□□ 1.12
SOD1P00441 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SOD1P00441 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
SOD1P00441 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.08■■□□□ 1.12
SOD1P00441 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.08■■□□□ 1.12
SOD1P00441 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SOD1P00441 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SOD1P00441 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.07■■□□□ 1.12
SOD1P00441 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.07■■□□□ 1.12
SOD1P00441 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.07■■□□□ 1.12
SOD1P00441 AC142381.2-201ENST00000566120 298 ntBASIC22.07■■□□□ 1.12
SOD1P00441 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.07■■□□□ 1.12
SOD1P00441 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.07■■□□□ 1.12
SOD1P00441 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOD1P00441 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.07■■□□□ 1.12
SOD1P00441 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOD1P00441 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.06■■□□□ 1.12
SOD1P00441 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOD1P00441 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOD1P00441 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SOD1P00441 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SOD1P00441 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.06■■□□□ 1.12
SOD1P00441 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.05■■□□□ 1.12
SOD1P00441 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.05■■□□□ 1.12
SOD1P00441 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SOD1P00441 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.05■■□□□ 1.12
SOD1P00441 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SOD1P00441 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SOD1P00441 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOD1P00441 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SOD1P00441 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOD1P00441 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOD1P00441 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SOD1P00441 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.04■■□□□ 1.12
SOD1P00441 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.04■■□□□ 1.12
SOD1P00441 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.04■■□□□ 1.12
SOD1P00441 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms