Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MARS-235ENST00000630803 183 ntTSL 3 BASIC10.14□□□□□ -0.79
USH2AO75445 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
USH2AO75445 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC10.14□□□□□ -0.79
USH2AO75445 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC10.14□□□□□ -0.79
USH2AO75445 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
USH2AO75445 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC10.13□□□□□ -0.79
USH2AO75445 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC10.13□□□□□ -0.79
USH2AO75445 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC10.13□□□□□ -0.79
USH2AO75445 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 AC010525.1-201ENST00000585559 441 ntBASIC10.13□□□□□ -0.79
USH2AO75445 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 AC096887.2-201ENST00000623443 1957 ntBASIC10.13□□□□□ -0.79
USH2AO75445 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
USH2AO75445 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
USH2AO75445 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC10.13□□□□□ -0.79
USH2AO75445 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC10.13□□□□□ -0.79
USH2AO75445 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
USH2AO75445 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
USH2AO75445 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
USH2AO75445 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 AF201337.1-201ENST00000520239 748 ntBASIC10.12□□□□□ -0.79
USH2AO75445 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC10.12□□□□□ -0.79
USH2AO75445 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC10.12□□□□□ -0.79
USH2AO75445 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.12□□□□□ -0.79
USH2AO75445 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC10.12□□□□□ -0.79
USH2AO75445 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC10.12□□□□□ -0.79
USH2AO75445 USP36-216ENST00000589424 970 ntTSL 5 BASIC10.12□□□□□ -0.79
USH2AO75445 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC10.12□□□□□ -0.79
USH2AO75445 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
USH2AO75445 AC128676.1-201ENST00000454392 318 ntBASIC10.11□□□□□ -0.79
USH2AO75445 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 KRT19P1-201ENST00000405746 1186 ntBASIC10.11□□□□□ -0.79
USH2AO75445 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.11□□□□□ -0.79
USH2AO75445 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
USH2AO75445 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 MIR4497-201ENST00000583208 89 ntBASIC10.11□□□□□ -0.79
USH2AO75445 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
USH2AO75445 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
USH2AO75445 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 RARRES2P4-201ENST00000514074 484 ntBASIC10.1□□□□□ -0.79
USH2AO75445 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC10.1□□□□□ -0.79
USH2AO75445 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 KRT18P11-201ENST00000435214 1283 ntBASIC10.1□□□□□ -0.79
USH2AO75445 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC10.1□□□□□ -0.79
USH2AO75445 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 AP006294.2-201ENST00000641667 209 ntBASIC10.1□□□□□ -0.79
USH2AO75445 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
USH2AO75445 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC10.1□□□□□ -0.79
USH2AO75445 LHPP-203ENST00000392757 840 ntTSL 3 BASIC10.1□□□□□ -0.79
USH2AO75445 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms