Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.3■■□□□ 1
PCDH7O60245 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.3■■□□□ 1
PCDH7O60245 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH7O60245 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.29■■□□□ 1
PCDH7O60245 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDH7O60245 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.29■■□□□ 1
PCDH7O60245 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.29■■□□□ 1
PCDH7O60245 AC010997.5-201ENST00000609182 354 ntBASIC21.29■■□□□ 1
PCDH7O60245 AC233723.2-201ENST00000623798 2106 ntBASIC21.29■■□□□ 1
PCDH7O60245 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDH7O60245 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH7O60245 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.28■■□□□ 1
PCDH7O60245 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.28■■□□□ 1
PCDH7O60245 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.28■■□□□ 1
PCDH7O60245 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.28■■□□□ 1
PCDH7O60245 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.28■■□□□ 1
PCDH7O60245 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH7O60245 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH7O60245 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH7O60245 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH7O60245 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.27■■□□□ 1
PCDH7O60245 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH7O60245 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH7O60245 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDH7O60245 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCDH7O60245 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH7O60245 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH7O60245 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 AC079834.2-201ENST00000609776 1949 ntBASIC21.26■□□□□ 0.99
PCDH7O60245 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH7O60245 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH7O60245 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH7O60245 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDH7O60245 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH7O60245 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH7O60245 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH7O60245 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH7O60245 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH7O60245 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH7O60245 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH7O60245 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH7O60245 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDH7O60245 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH7O60245 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH7O60245 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH7O60245 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH7O60245 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH7O60245 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH7O60245 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH7O60245 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH7O60245 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH7O60245 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH7O60245 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH7O60245 LINC01529-204ENST00000636474 1715 ntBASIC21.23■□□□□ 0.99
PCDH7O60245 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH7O60245 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH7O60245 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 AL117328.2-201ENST00000624617 1940 ntBASIC21.22■□□□□ 0.99
PCDH7O60245 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 UNC93B8-201ENST00000511903 705 ntBASIC21.22■□□□□ 0.99
PCDH7O60245 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDH7O60245 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH7O60245 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH7O60245 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDH7O60245 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH7O60245 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH7O60245 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH7O60245 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH7O60245 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH7O60245 AL035685.1-201ENST00000636663 812 ntBASIC21.21■□□□□ 0.99
PCDH7O60245 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH7O60245 AC009102.2-201ENST00000606772 1639 ntBASIC21.21■□□□□ 0.99
PCDH7O60245 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms