Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ATP2A1O14983 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 YBX1P1-201ENST00000445822 960 ntBASIC25.68■■□□□ 1.7
ATP2A1O14983 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.68■■□□□ 1.7
ATP2A1O14983 AL358852.1-201ENST00000623174 1268 ntBASIC25.68■■□□□ 1.7
ATP2A1O14983 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ATP2A1O14983 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.68■■□□□ 1.7
ATP2A1O14983 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.68■■□□□ 1.7
ATP2A1O14983 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP2A1O14983 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.67■■□□□ 1.7
ATP2A1O14983 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ATP2A1O14983 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
ATP2A1O14983 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ATP2A1O14983 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.67■■□□□ 1.7
ATP2A1O14983 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
ATP2A1O14983 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ATP2A1O14983 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.66■■□□□ 1.7
ATP2A1O14983 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.66■■□□□ 1.7
ATP2A1O14983 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.66■■□□□ 1.7
ATP2A1O14983 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP2A1O14983 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ATP2A1O14983 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ATP2A1O14983 AC027612.3-201ENST00000413684 1047 ntBASIC25.66■■□□□ 1.7
ATP2A1O14983 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP2A1O14983 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP2A1O14983 AC010525.1-201ENST00000585559 441 ntBASIC25.66■■□□□ 1.7
ATP2A1O14983 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.66■■□□□ 1.7
ATP2A1O14983 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.66■■□□□ 1.7
ATP2A1O14983 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ATP2A1O14983 LINC00543-201ENST00000567234 1845 ntBASIC25.65■■□□□ 1.7
ATP2A1O14983 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ATP2A1O14983 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.65■■□□□ 1.7
ATP2A1O14983 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.65■■□□□ 1.7
ATP2A1O14983 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.65■■□□□ 1.7
ATP2A1O14983 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATP2A1O14983 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.65■■□□□ 1.7
ATP2A1O14983 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ATP2A1O14983 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
ATP2A1O14983 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATP2A1O14983 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ATP2A1O14983 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.64■■□□□ 1.7
ATP2A1O14983 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATP2A1O14983 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.64■■□□□ 1.7
ATP2A1O14983 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATP2A1O14983 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
ATP2A1O14983 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.64■■□□□ 1.7
ATP2A1O14983 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ATP2A1O14983 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ATP2A1O14983 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ATP2A1O14983 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 AC034268.1-201ENST00000441047 882 ntBASIC25.63■■□□□ 1.69
ATP2A1O14983 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ATP2A1O14983 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.63■■□□□ 1.69
ATP2A1O14983 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.63■■□□□ 1.69
ATP2A1O14983 AP005435.1-201ENST00000529293 1178 ntBASIC25.63■■□□□ 1.69
ATP2A1O14983 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.63■■□□□ 1.69
ATP2A1O14983 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ATP2A1O14983 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP2A1O14983 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATP2A1O14983 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATP2A1O14983 AC123595.1-201ENST00000440769 1046 ntBASIC25.62■■□□□ 1.69
ATP2A1O14983 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.62■■□□□ 1.69
ATP2A1O14983 AL354811.1-201ENST00000610286 706 ntBASIC25.62■■□□□ 1.69
ATP2A1O14983 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.62■■□□□ 1.69
ATP2A1O14983 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.62■■□□□ 1.69
ATP2A1O14983 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ATP2A1O14983 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ATP2A1O14983 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP2A1O14983 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP2A1O14983 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.61■■□□□ 1.69
ATP2A1O14983 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ATP2A1O14983 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.61■■□□□ 1.69
ATP2A1O14983 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.61■■□□□ 1.69
ATP2A1O14983 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATP2A1O14983 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATP2A1O14983 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
ATP2A1O14983 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ATP2A1O14983 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.6■■□□□ 1.69
ATP2A1O14983 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.6■■□□□ 1.69
ATP2A1O14983 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
ATP2A1O14983 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATP2A1O14983 AC012414.1-201ENST00000556676 535 ntBASIC25.6■■□□□ 1.69
ATP2A1O14983 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ATP2A1O14983 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.6■■□□□ 1.69
ATP2A1O14983 AL031602.1-201ENST00000633169 911 ntBASIC25.6■■□□□ 1.69
ATP2A1O14983 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms