Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
AP3D1O14617 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
AP3D1O14617 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
AP3D1O14617 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AP3D1O14617 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3D1O14617 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
AP3D1O14617 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3D1O14617 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3D1O14617 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3D1O14617 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AP3D1O14617 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3D1O14617 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3D1O14617 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3D1O14617 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
AP3D1O14617 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3D1O14617 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
AP3D1O14617 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
AP3D1O14617 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
AP3D1O14617 AL451085.2-201ENST00000605085 799 ntBASIC20.74■□□□□ 0.91
AP3D1O14617 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
AP3D1O14617 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.74■□□□□ 0.91
AP3D1O14617 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3D1O14617 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
AP3D1O14617 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.73■□□□□ 0.91
AP3D1O14617 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
AP3D1O14617 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3D1O14617 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3D1O14617 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP3D1O14617 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3D1O14617 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.73■□□□□ 0.91
AP3D1O14617 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3D1O14617 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
AP3D1O14617 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.72■□□□□ 0.91
AP3D1O14617 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3D1O14617 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.72■□□□□ 0.91
AP3D1O14617 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.72■□□□□ 0.91
AP3D1O14617 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3D1O14617 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
AP3D1O14617 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3D1O14617 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.71■□□□□ 0.91
AP3D1O14617 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3D1O14617 AC009299.2-201ENST00000482477 511 ntBASIC20.71■□□□□ 0.91
AP3D1O14617 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3D1O14617 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
AP3D1O14617 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.71■□□□□ 0.91
AP3D1O14617 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3D1O14617 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.71■□□□□ 0.91
AP3D1O14617 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
AP3D1O14617 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
AP3D1O14617 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AP3D1O14617 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AP3D1O14617 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.7■□□□□ 0.9
AP3D1O14617 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3D1O14617 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.7■□□□□ 0.9
AP3D1O14617 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3D1O14617 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.7■□□□□ 0.9
AP3D1O14617 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3D1O14617 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3D1O14617 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
AP3D1O14617 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3D1O14617 AC233723.2-201ENST00000623798 2106 ntBASIC20.69■□□□□ 0.9
AP3D1O14617 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP3D1O14617 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
AP3D1O14617 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
AP3D1O14617 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3D1O14617 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3D1O14617 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
AP3D1O14617 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP3D1O14617 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.69■□□□□ 0.9
AP3D1O14617 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.69■□□□□ 0.9
AP3D1O14617 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
AP3D1O14617 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP3D1O14617 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms