Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC7O00311 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC7O00311 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC7O00311 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC7O00311 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC7O00311 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC7O00311 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.91■■□□□ 1.1
CDC7O00311 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC7O00311 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC7O00311 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC7O00311 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC7O00311 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC7O00311 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDC7O00311 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC7O00311 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC7O00311 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDC7O00311 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC7O00311 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC7O00311 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDC7O00311 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC7O00311 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC7O00311 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CDC7O00311 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC7O00311 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 UNC93B8-201ENST00000511903 705 ntBASIC21.89■■□□□ 1.09
CDC7O00311 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.89■■□□□ 1.09
CDC7O00311 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.89■■□□□ 1.09
CDC7O00311 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDC7O00311 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC7O00311 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC7O00311 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.88■■□□□ 1.09
CDC7O00311 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC7O00311 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC7O00311 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC7O00311 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDC7O00311 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC7O00311 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC7O00311 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CDC7O00311 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 AL117328.2-201ENST00000624617 1940 ntBASIC21.87■■□□□ 1.09
CDC7O00311 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC7O00311 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CDC7O00311 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDC7O00311 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC7O00311 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC7O00311 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC7O00311 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC7O00311 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC7O00311 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC7O00311 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.86■■□□□ 1.09
CDC7O00311 AL035685.1-201ENST00000636663 812 ntBASIC21.86■■□□□ 1.09
CDC7O00311 AC009102.2-201ENST00000606772 1639 ntBASIC21.86■■□□□ 1.09
CDC7O00311 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC7O00311 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC7O00311 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDC7O00311 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDC7O00311 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CDC7O00311 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC7O00311 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC7O00311 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC7O00311 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC7O00311 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC7O00311 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC7O00311 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC7O00311 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 LINC01529-204ENST00000636474 1715 ntBASIC21.84■■□□□ 1.09
CDC7O00311 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.84■■□□□ 1.09
CDC7O00311 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CDC7O00311 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC7O00311 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC7O00311 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC7O00311 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC7O00311 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC7O00311 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC7O00311 AC079834.2-201ENST00000609776 1949 ntBASIC21.83■■□□□ 1.09
CDC7O00311 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CDC7O00311 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CDC7O00311 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC7O00311 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC7O00311 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms