Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CGB1A6NKQ9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 MIR6722-201ENST00000617286 78 ntBASIC17.79■□□□□ 0.44
CGB1A6NKQ9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
CGB1A6NKQ9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.78■□□□□ 0.44
CGB1A6NKQ9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 BX664725.1-201ENST00000438252 379 ntBASIC17.78■□□□□ 0.44
CGB1A6NKQ9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CGB1A6NKQ9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 RARRES2P1-201ENST00000474487 481 ntBASIC17.77■□□□□ 0.44
CGB1A6NKQ9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CGB1A6NKQ9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGB1A6NKQ9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGB1A6NKQ9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGB1A6NKQ9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 AC092028.1-203ENST00000608262 953 ntBASIC17.75■□□□□ 0.43
CGB1A6NKQ9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 AC144652.1-201ENST00000609974 1624 ntBASIC17.75■□□□□ 0.43
CGB1A6NKQ9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CGB1A6NKQ9 EP400NL-214ENST00000641289 2402 ntBASIC17.74■□□□□ 0.43
CGB1A6NKQ9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms