Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01546A6NGU7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01546A6NGU7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LINC01546A6NGU7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.85■□□□□ 0.13
LINC01546A6NGU7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01546A6NGU7 LINC01521-201ENST00000504184 1943 ntBASIC15.84■□□□□ 0.13
LINC01546A6NGU7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01546A6NGU7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LINC01546A6NGU7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.83■□□□□ 0.13
LINC01546A6NGU7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 AC244015.2-201ENST00000616358 1861 ntBASIC15.83■□□□□ 0.12
LINC01546A6NGU7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01546A6NGU7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC01546A6NGU7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 AC093536.1-201ENST00000569153 554 ntBASIC15.81■□□□□ 0.12
LINC01546A6NGU7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC01546A6NGU7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 AL353803.4-201ENST00000565882 1934 ntBASIC15.8■□□□□ 0.12
LINC01546A6NGU7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 AC060814.1-201ENST00000554326 538 ntBASIC15.8■□□□□ 0.12
LINC01546A6NGU7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC01546A6NGU7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01546A6NGU7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms