Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3D21A4FU49 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3D21A4FU49 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3D21A4FU49 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.64■□□□□ 0.89
SH3D21A4FU49 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3D21A4FU49 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SH3D21A4FU49 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SH3D21A4FU49 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3D21A4FU49 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SH3D21A4FU49 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3D21A4FU49 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3D21A4FU49 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.63■□□□□ 0.89
SH3D21A4FU49 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.63■□□□□ 0.89
SH3D21A4FU49 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.63■□□□□ 0.89
SH3D21A4FU49 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3D21A4FU49 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3D21A4FU49 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3D21A4FU49 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3D21A4FU49 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3D21A4FU49 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3D21A4FU49 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SH3D21A4FU49 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3D21A4FU49 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH3D21A4FU49 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3D21A4FU49 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3D21A4FU49 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SH3D21A4FU49 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3D21A4FU49 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3D21A4FU49 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3D21A4FU49 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3D21A4FU49 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3D21A4FU49 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3D21A4FU49 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SH3D21A4FU49 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.58■□□□□ 0.89
SH3D21A4FU49 MTDHP2-201ENST00000601468 714 ntBASIC20.58■□□□□ 0.89
SH3D21A4FU49 AC010997.5-201ENST00000609182 354 ntBASIC20.58■□□□□ 0.89
SH3D21A4FU49 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3D21A4FU49 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.58■□□□□ 0.88
SH3D21A4FU49 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3D21A4FU49 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3D21A4FU49 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.58■□□□□ 0.88
SH3D21A4FU49 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3D21A4FU49 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3D21A4FU49 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3D21A4FU49 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3D21A4FU49 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.57■□□□□ 0.88
SH3D21A4FU49 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH3D21A4FU49 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3D21A4FU49 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3D21A4FU49 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3D21A4FU49 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3D21A4FU49 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SH3D21A4FU49 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3D21A4FU49 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms