Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM238LA0A1B0GVL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM238LA0A1B0GVL6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM238LA0A1B0GVL6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TMEM238LA0A1B0GVL6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM238LA0A1B0GVL6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM238LA0A1B0GVL6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 AC006077.2-201ENST00000623591 457 ntBASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM238LA0A1B0GVL6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 AC073130.3-201ENST00000624389 2278 ntBASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM238LA0A1B0GVL6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM238LA0A1B0GVL6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms