Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 LINC00565-201ENST00000562710 2331 ntBASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 AC127496.7-201ENST00000625110 1798 ntBASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00959A0A1B0GUT2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 AC012354.3-201ENST00000623734 483 ntBASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 AC242852.2-201ENST00000615738 1807 ntBASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00959A0A1B0GUT2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00959A0A1B0GUT2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 YBX1P4-201ENST00000392794 808 ntBASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 SNX5-217ENST00000606557 1087 ntBASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 CLDN5-201ENST00000403084 2357 ntBASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00959A0A1B0GUT2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00959A0A1B0GUT2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms