Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 CDCA4P2-201ENST00000441182 718 ntBASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.33■■□□□ 1.17
CCDC163A0A0D9SF12 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
CCDC163A0A0D9SF12 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
CCDC163A0A0D9SF12 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
CCDC163A0A0D9SF12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 AC137761.2-201ENST00000561729 223 ntBASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 AC145350.3-201ENST00000569033 163 ntBASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 AC073111.5-205ENST00000641717 521 ntBASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC163A0A0D9SF12 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CCDC163A0A0D9SF12 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 AC026185.1-201ENST00000445748 174 ntBASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC163A0A0D9SF12 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 KRT18P61-201ENST00000585825 1298 ntBASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 TPRG1LP1-201ENST00000598702 760 ntBASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC163A0A0D9SF12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCDC163A0A0D9SF12 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC163A0A0D9SF12 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms