Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV25A0A0B4J276 ANOS2P-203ENST00000472227 1816 ntBASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 AC135279.3-201ENST00000610945 1311 ntBASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 MIR3181-201ENST00000578512 73 ntBASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.75■□□□□ 0.27
TRAV25A0A0B4J276 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 AC006455.2-201ENST00000429931 906 ntBASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 AC106739.1-201ENST00000617035 715 ntBASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 AC136469.2-201ENST00000623944 1028 ntBASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV25A0A0B4J276 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 PBX2P1-201ENST00000493219 1291 ntBASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 AC110285.6-201ENST00000617652 491 ntBASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV25A0A0B4J276 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 AL353803.4-201ENST00000565882 1934 ntBASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV25A0A0B4J276 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 EDA-201ENST00000338901 1233 ntBASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 AC024257.2-201ENST00000549699 147 ntBASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV25A0A0B4J276 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV25A0A0B4J276 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 AC133637.1-201ENST00000624115 1537 ntBASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms