Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 AC012676.1-201ENST00000574705 1949 ntBASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV7-1A0A0A6YYK4 C17orf82-201ENST00000623772 1530 ntBASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 DUX4L4-201ENST00000566884 1269 ntBASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-1A0A0A6YYK4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AL356441.2-201ENST00000443009 864 ntBASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 MIR3621-201ENST00000580529 85 ntBASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC068473.5-201ENST00000616428 2072 ntBASIC17.3■□□□□ 0.36
TRBV7-1A0A0A6YYK4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC009086.3-201ENST00000623486 1008 ntBASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC241377.3-202ENST00000626088 1088 ntBASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC241585.3-202ENST00000628937 1088 ntBASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC245100.8-202ENST00000629247 1058 ntBASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-1A0A0A6YYK4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-1A0A0A6YYK4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV7-1A0A0A6YYK4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV7-1A0A0A6YYK4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV7-1A0A0A6YYK4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-1A0A0A6YYK4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms