Protein–RNA interactions for Protein: A0A087WX48

Uncharacterized protein, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A087WX48 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A087WX48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A087WX48 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A087WX48 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 KRT18P60-201ENST00000312876 1297 ntBASIC16.07■□□□□ 0.16
A0A087WX48 SPCS2P3-201ENST00000500401 656 ntBASIC16.07■□□□□ 0.16
A0A087WX48 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
A0A087WX48 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A087WX48 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
A0A087WX48 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
A0A087WX48 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
A0A087WX48 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 AC087393.1-201ENST00000582896 145 ntBASIC16.06■□□□□ 0.16
A0A087WX48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
A0A087WX48 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
A0A087WX48 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A087WX48 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.05■□□□□ 0.16
A0A087WX48 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.05■□□□□ 0.16
A0A087WX48 BHLHE23-202ENST00000612929 1109 ntBASIC16.05■□□□□ 0.16
A0A087WX48 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
A0A087WX48 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
A0A087WX48 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A087WX48 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.04■□□□□ 0.16
A0A087WX48 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
A0A087WX48 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.04■□□□□ 0.16
A0A087WX48 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
A0A087WX48 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.04■□□□□ 0.16
A0A087WX48 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.04■□□□□ 0.16
A0A087WX48 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.04■□□□□ 0.16
A0A087WX48 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.04■□□□□ 0.16
A0A087WX48 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A087WX48 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.04■□□□□ 0.16
A0A087WX48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.03■□□□□ 0.16
A0A087WX48 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 AL592295.1-201ENST00000400984 884 ntBASIC16.03■□□□□ 0.16
A0A087WX48 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.03■□□□□ 0.16
A0A087WX48 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
A0A087WX48 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A087WX48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.03■□□□□ 0.16
A0A087WX48 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
A0A087WX48 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
A0A087WX48 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
A0A087WX48 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.02■□□□□ 0.16
A0A087WX48 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
A0A087WX48 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
A0A087WX48 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.02■□□□□ 0.16
A0A087WX48 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
A0A087WX48 DUX4L18-201ENST00000553347 1267 ntBASIC16.02■□□□□ 0.16
A0A087WX48 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.02■□□□□ 0.16
A0A087WX48 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms