Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHD8Q9HCK8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RN7SL756P-201ENST00000488739 268 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC003072.1-201ENST00000510957 612 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 OR10V2P-201ENST00000525296 764 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MPI-212ENST00000565576 1148 ntTSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC100830.3-201ENST00000583044 554 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 HKR1-222ENST00000591417 525 ntTSL 4 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 PIN1P1-202ENST00000439639 301 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC114781.1-201ENST00000450559 1028 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MIR2110-201ENST00000459421 75 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ARL15-205ENST00000507646 578 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RAD52-212ENST00000541619 560 ntTSL 4 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 AP000553.1-201ENST00000610143 430 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 DDX6P2-201ENST00000619520 1455 ntBASIC12.37□□□□□ -0.43
CHD8Q9HCK8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CHD8Q9HCK8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 S100A1-203ENST00000368698 784 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 SSPN-207ENST00000540266 587 ntTSL 4 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 PSME1-210ENST00000561435 945 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC105105.4-201ENST00000610389 713 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CYP2T1P-202ENST00000641596 2535 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms