Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 LINC00265-2P-201ENST00000413372 782 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HILS1-202ENST00000545329 423 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AP005482.1-201ENST00000563722 1273 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 NDUFB10P1-201ENST00000567319 521 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 AC133552.6-201ENST00000613406 534 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHACTR1Q9C0D0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AC106827.1-201ENST00000366454 431 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 Z93015.1-201ENST00000451718 390 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 SNX29P1-201ENST00000548357 1007 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 ADAM3B-201ENST00000569937 840 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 AC017083.2-201ENST00000608069 979 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 MIR6775-201ENST00000617557 69 ntBASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHACTR1Q9C0D0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 AC138761.6-201ENST00000583997 1423 ntBASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PHACTR1Q9C0D0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms