Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 OR2I1P-209ENST00000641730 5365 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 GGTLC4P-201ENST00000402176 664 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AP000244.1-201ENST00000424582 201 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AL512599.1-201ENST00000430724 685 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 MIR4326-201ENST00000582203 59 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AC005777.1-201ENST00000588332 187 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AC006548.2-201ENST00000605217 529 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AC114271.1-201ENST00000612689 2813 ntBASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.45□□□□□ -0.1
SHKBP1Q8TBC3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC118758.2-201ENST00000614242 2813 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 VENTXP4-201ENST00000449029 958 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC092903.1-201ENST00000466506 262 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 RN7SL351P-201ENST00000469306 248 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC126755.5-201ENST00000622756 267 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AGAP10P-201ENST00000454844 2418 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 AC097376.2-205ENST00000610159 5334 ntBASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.44□□□□□ -0.1
SHKBP1Q8TBC3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHKBP1Q8TBC3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms