Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPSAP6-201ENST00000417882 882 ntBASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 BCRP4-201ENST00000506079 804 ntBASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 Z82244.1-201ENST00000631502 840 ntBASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC005562.1-201ENST00000583030 3219 ntBASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC004522.1-201ENST00000419978 654 ntBASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 FDPSP7-201ENST00000429043 1054 ntBASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 DGAT2L7P-201ENST00000602462 744 ntBASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SHROOM1Q2M3G4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 AC114812.4-201ENST00000506676 757 ntBASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 AC113347.2-201ENST00000512350 279 ntBASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SHROOM1Q2M3G4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms