Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 AC004241.5-201ENST00000623870 2448 ntBASIC13.44□□□□□ -0.26
AP1S2P56377 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 AL139385.1-201ENST00000611744 3272 ntBASIC13.44□□□□□ -0.26
AP1S2P56377 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 PYY2-201ENST00000315776 282 ntBASIC13.44□□□□□ -0.26
AP1S2P56377 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 ERP29P1-201ENST00000442902 706 ntBASIC13.44□□□□□ -0.26
AP1S2P56377 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.44□□□□□ -0.26
AP1S2P56377 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.44□□□□□ -0.26
AP1S2P56377 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP1S2P56377 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S2P56377 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.43□□□□□ -0.26
AP1S2P56377 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
AP1S2P56377 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 TUBB2BP1-201ENST00000404155 871 ntBASIC13.43□□□□□ -0.26
AP1S2P56377 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
AP1S2P56377 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.43□□□□□ -0.26
AP1S2P56377 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP1S2P56377 DGCR9-201ENST00000609630 2415 ntBASIC13.43□□□□□ -0.26
AP1S2P56377 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.43□□□□□ -0.26
AP1S2P56377 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
AP1S2P56377 AC010970.1-201ENST00000445125 1848 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms