Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.44□□□□□ -0.42
SUMO3P55854 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 CICP4-201ENST00000447359 2812 ntBASIC12.44□□□□□ -0.42
SUMO3P55854 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.44□□□□□ -0.42
SUMO3P55854 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 AC092115.1-201ENST00000566277 1402 ntBASIC12.44□□□□□ -0.42
SUMO3P55854 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SUMO3P55854 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
SUMO3P55854 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SUMO3P55854 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SUMO3P55854 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 IL9RP3-201ENST00000442856 1674 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.43□□□□□ -0.42
SUMO3P55854 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 AC078991.1-201ENST00000437297 610 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 AC092638.2-201ENST00000441105 947 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 RNA5SP423-201ENST00000517127 109 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.43□□□□□ -0.42
SUMO3P55854 VENTXP3-201ENST00000546480 773 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 RPL17P45-201ENST00000586289 509 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
SUMO3P55854 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.43□□□□□ -0.42
SUMO3P55854 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 YRDCP1-201ENST00000621419 643 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 AC068587.10-201ENST00000641210 219 ntBASIC12.43□□□□□ -0.42
SUMO3P55854 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.43□□□□□ -0.42
SUMO3P55854 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.43□□□□□ -0.42
SUMO3P55854 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SUMO3P55854 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms