Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 AC253536.4-201ENST00000440539 267 ntBASIC13.72□□□□□ -0.21
CSNK1DP48730 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 CTBP2P4-201ENST00000513884 920 ntBASIC13.72□□□□□ -0.21
CSNK1DP48730 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC13.72□□□□□ -0.21
CSNK1DP48730 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CSNK1DP48730 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CSNK1DP48730 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSNK1DP48730 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CSNK1DP48730 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.72□□□□□ -0.21
CSNK1DP48730 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1DP48730 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSNK1DP48730 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSNK1DP48730 SNORD23-201ENST00000408876 110 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1DP48730 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1DP48730 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1DP48730 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.71□□□□□ -0.21
CSNK1DP48730 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1DP48730 PIN4P1-201ENST00000451079 396 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 LDHBP1-201ENST00000455730 1119 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 ALG1L6P-201ENST00000515248 758 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.71□□□□□ -0.21
CSNK1DP48730 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1DP48730 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1DP48730 AC010976.2-201ENST00000609697 852 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 AC073869.4-201ENST00000620841 800 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1DP48730 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1DP48730 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1DP48730 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1DP48730 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1DP48730 POM121L4P-202ENST00000427789 1891 ntBASIC13.71□□□□□ -0.21
CSNK1DP48730 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CSNK1DP48730 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.71□□□□□ -0.22
CSNK1DP48730 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.71□□□□□ -0.22
CSNK1DP48730 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CSNK1DP48730 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.71□□□□□ -0.22
CSNK1DP48730 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CSNK1DP48730 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 AC105206.1-202ENST00000314927 2368 ntBASIC13.71□□□□□ -0.22
CSNK1DP48730 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1DP48730 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1DP48730 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1DP48730 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CSNK1DP48730 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms