Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.09□□□□□ -0.15
FDFT1P37268 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.09□□□□□ -0.15
FDFT1P37268 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.09□□□□□ -0.15
FDFT1P37268 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.09□□□□□ -0.15
FDFT1P37268 AC091544.8-201ENST00000619490 361 ntBASIC14.09□□□□□ -0.15
FDFT1P37268 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 KRT18P9-201ENST00000604826 1300 ntBASIC14.09□□□□□ -0.15
FDFT1P37268 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.08□□□□□ -0.15
FDFT1P37268 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FDFT1P37268 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
FDFT1P37268 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FDFT1P37268 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 AC060814.4-201ENST00000594169 2163 ntBASIC14.08□□□□□ -0.16
FDFT1P37268 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.08□□□□□ -0.16
FDFT1P37268 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.08□□□□□ -0.16
FDFT1P37268 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
FDFT1P37268 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 RN7SL788P-201ENST00000460504 316 ntBASIC14.08□□□□□ -0.16
FDFT1P37268 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FDFT1P37268 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.08□□□□□ -0.16
FDFT1P37268 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.08□□□□□ -0.16
FDFT1P37268 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.08□□□□□ -0.16
FDFT1P37268 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.08□□□□□ -0.16
FDFT1P37268 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FDFT1P37268 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.08□□□□□ -0.16
FDFT1P37268 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FDFT1P37268 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FDFT1P37268 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.07□□□□□ -0.16
FDFT1P37268 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FDFT1P37268 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.07□□□□□ -0.16
FDFT1P37268 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FDFT1P37268 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FDFT1P37268 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.07□□□□□ -0.16
FDFT1P37268 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms