Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.93□□□□□ -0.34
NR4A1P22736 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 CNN2P10-201ENST00000443067 918 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 HOMER2P2-201ENST00000451621 847 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.93□□□□□ -0.34
NR4A1P22736 C2orf69P2-201ENST00000562032 1123 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ZACNP1-201ENST00000612259 710 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.93□□□□□ -0.34
NR4A1P22736 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 PTPRVP-205ENST00000641549 5067 ntBASIC12.93□□□□□ -0.34
NR4A1P22736 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.93□□□□□ -0.34
NR4A1P22736 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NR4A1P22736 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.93□□□□□ -0.34
NR4A1P22736 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.92□□□□□ -0.34
NR4A1P22736 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 TUBB1P2-201ENST00000422712 1306 ntBASIC12.92□□□□□ -0.34
NR4A1P22736 TUBB1P1-201ENST00000503144 1300 ntBASIC12.92□□□□□ -0.34
NR4A1P22736 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 AC138696.2-201ENST00000607376 223 ntBASIC12.92□□□□□ -0.34
NR4A1P22736 AC108024.1-201ENST00000626286 1721 ntBASIC12.92□□□□□ -0.34
NR4A1P22736 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.92□□□□□ -0.34
NR4A1P22736 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.92□□□□□ -0.34
NR4A1P22736 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.92□□□□□ -0.34
NR4A1P22736 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NR4A1P22736 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms