Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 AL365181.1-201ENST00000564032 1828 ntBASIC16.48■□□□□ 0.23
POLR3DP05423 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR3DP05423 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR3DP05423 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
POLR3DP05423 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
POLR3DP05423 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.48■□□□□ 0.23
POLR3DP05423 MIR4326-201ENST00000582203 59 ntBASIC16.48■□□□□ 0.23
POLR3DP05423 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 CR392039.2-201ENST00000623182 509 ntBASIC16.48■□□□□ 0.23
POLR3DP05423 AC011471.3-201ENST00000623576 402 ntBASIC16.48■□□□□ 0.23
POLR3DP05423 AL451007.2-201ENST00000632004 563 ntBASIC16.48■□□□□ 0.23
POLR3DP05423 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR3DP05423 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR3DP05423 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
POLR3DP05423 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
POLR3DP05423 NRADDP-202ENST00000641269 1585 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.47■□□□□ 0.23
POLR3DP05423 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
POLR3DP05423 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
POLR3DP05423 AL627389.1-201ENST00000413508 1182 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.47■□□□□ 0.23
POLR3DP05423 AC008026.2-201ENST00000495438 348 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.47■□□□□ 0.23
POLR3DP05423 AC093826.1-201ENST00000508655 993 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.47■□□□□ 0.23
POLR3DP05423 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.47■□□□□ 0.23
POLR3DP05423 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.47■□□□□ 0.23
POLR3DP05423 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.47■□□□□ 0.23
POLR3DP05423 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 AC010976.2-201ENST00000609697 852 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.47■□□□□ 0.23
POLR3DP05423 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.47■□□□□ 0.23
POLR3DP05423 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
POLR3DP05423 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
POLR3DP05423 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR3DP05423 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.46■□□□□ 0.23
POLR3DP05423 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
POLR3DP05423 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
POLR3DP05423 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
POLR3DP05423 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
POLR3DP05423 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
POLR3DP05423 AL355334.1-201ENST00000417713 215 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 RPL13AP19-201ENST00000434320 584 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 AC114501.1-201ENST00000445949 172 ntBASIC16.46■□□□□ 0.23
POLR3DP05423 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.46■□□□□ 0.23
POLR3DP05423 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.46■□□□□ 0.23
POLR3DP05423 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms