Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORA57-201ENST00000383870 149 ntBASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AC132825.4-202ENST00000578792 434 ntBASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 AL161772.1-201ENST00000610494 4412 ntBASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CTC1Q2NKJ3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC064801.2-201ENST00000625052 1303 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AL137244.1-201ENST00000422931 865 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC009712.1-201ENST00000564938 316 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AC006116.2-201ENST00000589958 988 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 NEK4P3-201ENST00000604859 544 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.73□□□□□ -0.05
CTC1Q2NKJ3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 AC007952.5-201ENST00000572818 1486 ntBASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 AC079414.2-201ENST00000567157 1104 ntBASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 RN7SL605P-201ENST00000577229 281 ntBASIC14.72□□□□□ -0.05
CTC1Q2NKJ3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms