Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 AC138392.1-201ENST00000427577 921 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 CDCA4P3-201ENST00000442572 689 ntBASIC19.66■□□□□ 0.74
ATP7AQ04656 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC19.66■□□□□ 0.74
ATP7AQ04656 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP7AQ04656 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP7AQ04656 PAX6-247ENST00000638965 979 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP7AQ04656 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATP7AQ04656 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 ABCD1P2-201ENST00000429313 1601 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 AC005089.1-201ENST00000619486 2241 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP7AQ04656 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP7AQ04656 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATP7AQ04656 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP7AQ04656 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATP7AQ04656 TFAM-201ENST00000373895 973 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP7AQ04656 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ATP7AQ04656 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP7AQ04656 AC007312.1-201ENST00000427493 258 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 AC007622.1-201ENST00000488371 535 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 AC080023.2-201ENST00000532615 208 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC19.65■□□□□ 0.74
ATP7AQ04656 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP7AQ04656 AL591926.3-201ENST00000611630 238 ntBASIC19.65■□□□□ 0.74
ATP7AQ04656 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
ATP7AQ04656 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP7AQ04656 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP7AQ04656 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC19.64■□□□□ 0.74
ATP7AQ04656 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP7AQ04656 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC19.64■□□□□ 0.74
ATP7AQ04656 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP7AQ04656 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC19.64■□□□□ 0.74
ATP7AQ04656 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP7AQ04656 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP7AQ04656 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP7AQ04656 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP7AQ04656 RPL21P135-201ENST00000442539 791 ntBASIC19.64■□□□□ 0.73
ATP7AQ04656 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC19.64■□□□□ 0.73
ATP7AQ04656 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP7AQ04656 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATP7AQ04656 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC19.64■□□□□ 0.73
ATP7AQ04656 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP7AQ04656 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP7AQ04656 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATP7AQ04656 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 AP000897.1-201ENST00000584036 1613 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATP7AQ04656 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATP7AQ04656 AC008040.5-201ENST00000599781 1781 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATP7AQ04656 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP7AQ04656 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 FTH1P19-201ENST00000402402 528 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 AL049597.1-201ENST00000447415 555 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 AL929472.4-201ENST00000447422 691 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP7AQ04656 AC103706.1-201ENST00000561761 679 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP7AQ04656 CALM3-206ENST00000594523 540 ntTSL 4 BASIC19.63■□□□□ 0.73
ATP7AQ04656 U62317.4-201ENST00000609758 448 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATP7AQ04656 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP7AQ04656 KRT18P45-201ENST00000515347 1333 ntBASIC19.63■□□□□ 0.73
ATP7AQ04656 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP7AQ04656 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP7AQ04656 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
ATP7AQ04656 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP7AQ04656 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP7AQ04656 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP7AQ04656 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms