Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AP002761.4-201ENST00000565433 3361 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RPL3P2-204ENST00000413027 1203 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AC018638.5-201ENST00000450885 754 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SCARNA12-201ENST00000459155 270 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 NUP210P1-202ENST00000504322 710 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RTN3P1-201ENST00000536295 711 ntBASIC12.07□□□□□ -0.48
HIST1H3AP68431 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H3AP68431 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H3AP68431 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HIST1H3AP68431 DLX4-206ENST00000611342 1662 ntBASIC12.06□□□□□ -0.48
HIST1H3AP68431 NUTM2HP-201ENST00000442076 2498 ntBASIC12.06□□□□□ -0.48
HIST1H3AP68431 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HIST1H3AP68431 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HIST1H3AP68431 MIR193BHG-211ENST00000641433 5365 ntBASIC12.06□□□□□ -0.48
HIST1H3AP68431 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.06□□□□□ -0.48
HIST1H3AP68431 AC006372.4-201ENST00000624122 1543 ntBASIC12.06□□□□□ -0.48
HIST1H3AP68431 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HIST1H3AP68431 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms