Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC115284.2-201ENST00000624646 2054 ntBASIC15.03■□□□□ -0
CASP4P49662 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASP4P49662 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASP4P49662 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASP4P49662 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASP4P49662 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASP4P49662 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.02■□□□□ -0
CASP4P49662 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.02■□□□□ -0
CASP4P49662 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.02■□□□□ -0
CASP4P49662 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.02■□□□□ -0
CASP4P49662 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.02■□□□□ -0
CASP4P49662 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CASP4P49662 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CASP4P49662 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.02■□□□□ -0
CASP4P49662 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.02■□□□□ -0
CASP4P49662 OR52M2P-201ENST00000414298 959 ntBASIC15.02■□□□□ -0
CASP4P49662 AC005077.3-201ENST00000449614 213 ntBASIC15.02■□□□□ -0
CASP4P49662 FGFR3P1-201ENST00000449999 601 ntBASIC15.02■□□□□ -0
CASP4P49662 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.02■□□□□ -0
CASP4P49662 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.02■□□□□ -0
CASP4P49662 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.02■□□□□ -0
CASP4P49662 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.02■□□□□ -0
CASP4P49662 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.02■□□□□ -0
CASP4P49662 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.02■□□□□ -0
CASP4P49662 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.02■□□□□ -0
CASP4P49662 PRKXP1-201ENST00000561423 1122 ntBASIC15.02■□□□□ -0
CASP4P49662 AC103810.10-201ENST00000606504 343 ntBASIC15.02■□□□□ -0
CASP4P49662 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.02■□□□□ -0
CASP4P49662 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASP4P49662 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CASP4P49662 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASP4P49662 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASP4P49662 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.02□□□□□ -0.01
CASP4P49662 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CASP4P49662 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASP4P49662 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.02□□□□□ -0.01
CASP4P49662 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 CICP20-201ENST00000443330 2801 ntBASIC15.02□□□□□ -0.01
CASP4P49662 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASP4P49662 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.02□□□□□ -0.01
CASP4P49662 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CASP4P49662 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.02□□□□□ -0.01
CASP4P49662 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CASP4P49662 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CASP4P49662 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.01□□□□□ -0.01
CASP4P49662 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CASP4P49662 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 AP002761.4-201ENST00000565433 3361 ntBASIC15.01□□□□□ -0.01
CASP4P49662 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CASP4P49662 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CASP4P49662 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CASP4P49662 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.01□□□□□ -0.01
CASP4P49662 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.01□□□□□ -0.01
CASP4P49662 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 TUBB2BP1-201ENST00000404155 871 ntBASIC15.01□□□□□ -0.01
CASP4P49662 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CASP4P49662 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.01□□□□□ -0.01
CASP4P49662 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.01□□□□□ -0.01
CASP4P49662 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
CASP4P49662 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.01□□□□□ -0.01
CASP4P49662 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.01□□□□□ -0.01
CASP4P49662 OR5BD1P-201ENST00000532527 817 ntBASIC15.01□□□□□ -0.01
CASP4P49662 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.01□□□□□ -0.01
CASP4P49662 AL132994.1-201ENST00000554098 400 ntBASIC15.01□□□□□ -0.01
CASP4P49662 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.01□□□□□ -0.01
CASP4P49662 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASP4P49662 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.01□□□□□ -0.01
CASP4P49662 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms