Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNX20-205ENST00000610485 557 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 MDC1-209ENST00000613547 830 ntTSL 5 BASIC17.15■□□□□ 0.34
COL15A1P39059 AC004466.2-201ENST00000614749 516 ntBASIC17.15■□□□□ 0.34
COL15A1P39059 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC17.15■□□□□ 0.34
COL15A1P39059 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL15A1P39059 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.14■□□□□ 0.34
COL15A1P39059 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL15A1P39059 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL15A1P39059 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL15A1P39059 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
COL15A1P39059 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
COL15A1P39059 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 AC108024.1-201ENST00000626286 1721 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 AC012358.2-201ENST00000430010 1434 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 AL008638.4-201ENST00000624792 1315 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COL15A1P39059 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COL15A1P39059 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 RN7SKP212-201ENST00000410851 328 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 AC006328.1-201ENST00000437571 379 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 AC007679.1-201ENST00000458609 502 ntBASIC17.14■□□□□ 0.33
COL15A1P39059 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC17.14■□□□□ 0.33
COL15A1P39059 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.14■□□□□ 0.33
COL15A1P39059 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC17.14■□□□□ 0.33
COL15A1P39059 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL15A1P39059 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.13■□□□□ 0.33
COL15A1P39059 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
COL15A1P39059 AL358781.1-202ENST00000321081 1360 ntBASIC17.13■□□□□ 0.33
COL15A1P39059 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.13■□□□□ 0.33
COL15A1P39059 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC17.13■□□□□ 0.33
COL15A1P39059 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC17.13■□□□□ 0.33
COL15A1P39059 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC17.13■□□□□ 0.33
COL15A1P39059 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
COL15A1P39059 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 ABCC6P1-203ENST00000565566 1170 ntBASIC17.13■□□□□ 0.33
COL15A1P39059 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.13■□□□□ 0.33
COL15A1P39059 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.13■□□□□ 0.33
COL15A1P39059 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL15A1P39059 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.13■□□□□ 0.33
COL15A1P39059 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL15A1P39059 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 ZNF493-208ENST00000599461 1769 ntBASIC17.12■□□□□ 0.33
COL15A1P39059 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 CFL1P6-201ENST00000400899 494 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms