Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 AC083964.2-201ENST00000623988 2396 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 FUCA1P1-201ENST00000374476 1351 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 AL627389.1-201ENST00000413508 1182 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC11.67□□□□□ -0.54
COL8A2P25067 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 MIR4326-201ENST00000582203 59 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 CR392039.2-201ENST00000623182 509 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 AC127024.7-201ENST00000625101 200 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 AL451007.2-201ENST00000632004 563 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC11.67□□□□□ -0.54
COL8A2P25067 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 AL365181.1-201ENST00000564032 1828 ntBASIC11.67□□□□□ -0.54
COL8A2P25067 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
COL8A2P25067 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
COL8A2P25067 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.67□□□□□ -0.54
COL8A2P25067 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
COL8A2P25067 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
COL8A2P25067 DKKL1P1-201ENST00000400550 698 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC11.66□□□□□ -0.54
COL8A2P25067 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 AK2P2-201ENST00000439142 405 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 AC114501.1-201ENST00000445949 172 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 KRT18P62-201ENST00000446618 1287 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.66□□□□□ -0.54
COL8A2P25067 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 MIR4472-1-201ENST00000584349 80 ntBASIC11.66□□□□□ -0.54
COL8A2P25067 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
COL8A2P25067 COQ4-204ENST00000608951 781 ntTSL 2 BASIC11.66□□□□□ -0.54
COL8A2P25067 AC006158.1-201ENST00000610661 249 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms