Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL3P10147 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL3P10147 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 PSAT1P2-201ENST00000426107 972 ntBASIC12.51□□□□□ -0.41
CCL3P10147 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL3P10147 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL3P10147 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 AL359219.1-201ENST00000556311 934 ntBASIC12.51□□□□□ -0.41
CCL3P10147 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.51□□□□□ -0.41
CCL3P10147 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CCL3P10147 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3P10147 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL3P10147 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 ZNF493-208ENST00000599461 1769 ntBASIC12.51□□□□□ -0.41
CCL3P10147 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3P10147 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3P10147 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CCL3P10147 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 AC010327.5-201ENST00000586923 3061 ntBASIC12.5□□□□□ -0.41
CCL3P10147 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCL3P10147 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCL3P10147 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL3P10147 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3P10147 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 GCSHP3-201ENST00000431120 391 ntBASIC12.5□□□□□ -0.41
CCL3P10147 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 RPL13AP19-201ENST00000434320 584 ntBASIC12.5□□□□□ -0.41
CCL3P10147 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3P10147 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.5□□□□□ -0.41
CCL3P10147 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3P10147 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL3P10147 TREHP1-201ENST00000531328 465 ntBASIC12.5□□□□□ -0.41
CCL3P10147 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
CCL3P10147 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.5□□□□□ -0.41
CCL3P10147 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 AC026120.2-201ENST00000617239 309 ntBASIC12.5□□□□□ -0.41
CCL3P10147 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CCL3P10147 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CCL3P10147 KRT8P42-201ENST00000405771 1399 ntBASIC12.5□□□□□ -0.41
CCL3P10147 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3P10147 AC024075.2-201ENST00000598112 1473 ntBASIC12.5□□□□□ -0.41
CCL3P10147 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms