Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA4P06727 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 AL139424.3-202ENST00000641619 917 ntBASIC13.9□□□□□ -0.18
APOA4P06727 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA4P06727 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 AC093462.1-201ENST00000621167 1683 ntBASIC13.9□□□□□ -0.18
APOA4P06727 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA4P06727 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA4P06727 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 PCDHA6-201ENST00000378126 3267 ntBASIC13.9□□□□□ -0.18
APOA4P06727 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOA4P06727 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOA4P06727 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
APOA4P06727 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA4P06727 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA4P06727 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
APOA4P06727 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOA4P06727 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
APOA4P06727 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOA4P06727 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
APOA4P06727 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOA4P06727 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
APOA4P06727 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 AGGF1P10-201ENST00000635005 2191 ntBASIC13.89□□□□□ -0.19
APOA4P06727 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 AC008132.1-202ENST00000342005 1389 ntBASIC13.89□□□□□ -0.19
APOA4P06727 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
APOA4P06727 BX679664.3-201ENST00000414070 555 ntBASIC13.89□□□□□ -0.19
APOA4P06727 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.89□□□□□ -0.19
APOA4P06727 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.89□□□□□ -0.19
APOA4P06727 AL353637.1-201ENST00000451571 732 ntBASIC13.89□□□□□ -0.19
APOA4P06727 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 AC113935.1-201ENST00000471722 555 ntBASIC13.89□□□□□ -0.19
APOA4P06727 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
APOA4P06727 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.89□□□□□ -0.19
APOA4P06727 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
APOA4P06727 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.89□□□□□ -0.19
APOA4P06727 AL356740.1-201ENST00000602192 1297 ntBASIC13.89□□□□□ -0.19
APOA4P06727 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 AL161773.1-201ENST00000624845 863 ntBASIC13.89□□□□□ -0.19
APOA4P06727 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 AC060814.4-201ENST00000594169 2163 ntBASIC13.89□□□□□ -0.19
APOA4P06727 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA4P06727 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA4P06727 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 KRT18P9-201ENST00000604826 1300 ntBASIC13.89□□□□□ -0.19
APOA4P06727 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA4P06727 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.88□□□□□ -0.19
APOA4P06727 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.88□□□□□ -0.19
APOA4P06727 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APOA4P06727 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA4P06727 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA4P06727 LINC00638-201ENST00000555578 2518 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms