Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ZIC3O60481 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 LDHBP1-201ENST00000455730 1119 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.36□□□□□ -0.43
ZIC3O60481 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.36□□□□□ -0.43
ZIC3O60481 KRT18P37-201ENST00000520711 1282 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 AC013553.1-201ENST00000560906 267 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.36□□□□□ -0.43
ZIC3O60481 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.36□□□□□ -0.43
ZIC3O60481 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 AC092053.3-201ENST00000641308 4975 ntBASIC12.36□□□□□ -0.43
ZIC3O60481 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
ZIC3O60481 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.35□□□□□ -0.43
ZIC3O60481 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 KRT8P42-201ENST00000405771 1399 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 FAM21EP-201ENST00000417804 985 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 PSAT1P2-201ENST00000426107 972 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 AC103563.1-201ENST00000429316 123 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.35□□□□□ -0.43
ZIC3O60481 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 CTBP2P4-201ENST00000513884 920 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.35□□□□□ -0.43
ZIC3O60481 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.35□□□□□ -0.43
ZIC3O60481 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 TRMT112P3-201ENST00000580149 358 ntBASIC12.35□□□□□ -0.43
ZIC3O60481 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZIC3O60481 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.35□□□□□ -0.43
ZIC3O60481 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
ZIC3O60481 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
ZIC3O60481 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZIC3O60481 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.35□□□□□ -0.43
ZIC3O60481 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms