Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC072061.1-201ENST00000569710 2234 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC106818.1-201ENST00000623223 3242 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 MIR1247-201ENST00000408206 136 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 AC006987.1-201ENST00000413610 527 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 AC007274.1-201ENST00000439805 662 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 BX284668.4-201ENST00000453917 508 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 NDUFV2P1-201ENST00000596415 907 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 TUBBP5-203ENST00000508529 1334 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 AC135782.3-201ENST00000562782 2105 ntBASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
HLA-DRB4X5D2U9 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HLA-DRB4X5D2U9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms