Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.47□□□□□ -0.41
SUMO3P55854 AL354861.1-201ENST00000445213 355 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.47□□□□□ -0.41
SUMO3P55854 AC100858.1-201ENST00000514059 1228 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 AP002803.1-201ENST00000528836 498 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.47□□□□□ -0.41
SUMO3P55854 AC007952.4-201ENST00000573866 637 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 RN7SL470P-201ENST00000583069 259 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SUMO3P55854 AC128714.1-201ENST00000637035 887 ntBASIC12.47□□□□□ -0.41
SUMO3P55854 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SUMO3P55854 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SUMO3P55854 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SUMO3P55854 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SUMO3P55854 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SUMO3P55854 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SUMO3P55854 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SUMO3P55854 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.46□□□□□ -0.41
SUMO3P55854 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SUMO3P55854 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.46□□□□□ -0.41
SUMO3P55854 AC041040.1-201ENST00000425197 460 ntBASIC12.46□□□□□ -0.41
SUMO3P55854 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.46□□□□□ -0.41
SUMO3P55854 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.46□□□□□ -0.41
SUMO3P55854 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.46□□□□□ -0.41
SUMO3P55854 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 DPY19L2P5-201ENST00000456300 331 ntBASIC12.46□□□□□ -0.41
SUMO3P55854 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.46□□□□□ -0.41
SUMO3P55854 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 AC068867.1-201ENST00000559855 150 ntBASIC12.46□□□□□ -0.41
SUMO3P55854 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.46□□□□□ -0.41
SUMO3P55854 RN7SL357P-201ENST00000581065 298 ntBASIC12.46□□□□□ -0.41
SUMO3P55854 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SUMO3P55854 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 AC011491.1-203ENST00000637688 543 ntBASIC12.46□□□□□ -0.41
SUMO3P55854 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.46□□□□□ -0.41
SUMO3P55854 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SUMO3P55854 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.46□□□□□ -0.42
SUMO3P55854 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.46□□□□□ -0.42
SUMO3P55854 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.46□□□□□ -0.42
SUMO3P55854 MEX3B-202ENST00000558133 4333 ntBASIC12.46□□□□□ -0.42
SUMO3P55854 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.46□□□□□ -0.42
SUMO3P55854 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SUMO3P55854 AC020658.7-201ENST00000624274 2442 ntBASIC12.46□□□□□ -0.42
SUMO3P55854 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SUMO3P55854 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms